RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 COL4A6Q14031 1691 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 GLYATL1P3A0A0U1RQE8 302 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.9■□□□□ 0.3
NEK3-206ENST00000611833 DFNA5O60443 496 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 TRBC1P01850 177 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 HNF1BP35680 557 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 HPCAP84074 193 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 HMGCS1Q01581 520 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 MAPKAPK3Q16644 382 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 FAM174BQ3ZCQ3 159 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 CACHD1Q5VU97 1274 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 LYPLAL1Q5VWZ2 237 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 LEMD2Q8NC56 503 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 OR2T12Q8NG77 320 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 B4GALNT2Q8NHY0 566 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 ULK4Q96C45 1275 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 ISOC1Q96CN7 298 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 DPY30Q9C005 99 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 FARSBQ9NSD9 589 aaKnown RBP16.9■□□□□ 0.3
NEK3-206ENST00000611833 VAPAQ9P0L0 249 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 EBF1Q9UH73 591 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 ZNF490Q9ULM2 529 aaPredicted RBP16.9■□□□□ 0.3
NEK3-206ENST00000611833 SCN8AQ9UQD0 1980 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 TRIM64A6NGJ6 449 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 SEC22BO75396 215 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 ADARB1P78563 741 aaKnown RBP16.9■□□□□ 0.3
NEK3-206ENST00000611833 CHRNA6Q15825 494 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 ZIK1Q3SY52 487 aaPredicted RBP16.9■□□□□ 0.3
NEK3-206ENST00000611833 CLEC4FQ8N1N0 589 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 AUTS2Q8WXX7 1259 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 RHBDF1Q96CC6 855 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 ZNF583Q96ND8 569 aa16.9■□□□□ 0.3
NEK3-206ENST00000611833 K7EPI3 171 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 MYCP01106 439 aaPredicted RBP16.89■□□□□ 0.29
NEK3-206ENST00000611833 BPIP17213 487 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 GNPDA1P46926 289 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 DCTN2Q13561 401 aaKnown RBP16.89■□□□□ 0.29
NEK3-206ENST00000611833 KIAA0040Q15053 153 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 CRY1Q16526 586 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 CDKN3Q16667 212 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 SPOUT1Q5T280 376 aaKnown RBP16.89■□□□□ 0.29
NEK3-206ENST00000611833 GPRC6AQ5T6X5 926 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 LIX1Q8N485 282 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 OR10A6Q8NH74 314 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 EZH1Q92800 747 aaPredicted RBP16.89■□□□□ 0.29
NEK3-206ENST00000611833 TMBIM1Q969X1 311 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 CFHR5Q9BXR6 569 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 UGT2B28Q9BY64 529 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 CXorf21Q9HAI6 301 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 NTN4Q9HB63 628 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 IL21Q9HBE4 155 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 CLEC4EQ9ULY5 219 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 HEMK1Q9Y5R4 338 aaPredicted RBP16.89■□□□□ 0.29
NEK3-206ENST00000611833 OBSL1O75147 1896 aa16.89■□□□□ 0.29
NEK3-206ENST00000611833 H0YAE9 185 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 OLFM2O95897 454 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 EPB42P16452 691 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 MTHFRP42898 656 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 ALDH3A2P51648 485 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 ARSFP54793 590 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 NUP107P57740 925 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 RAB33AQ14088 237 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 ARHGEF7Q14155 803 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 FAM43BQ6ZT52 329 aaPredicted RBP16.88■□□□□ 0.29
NEK3-206ENST00000611833 USP51Q70EK9 711 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 STK32CQ86UX6 486 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 GAB3Q8WWW8 586 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 GTF2H4Q92759 462 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 LRTM1Q9HBL6 345 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 PCDHGA11Q9Y5H2 935 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 INSL5Q9Y5Q6 135 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 ZNF106Q9H2Y7 1883 aaKnown RBP16.88■□□□□ 0.29
NEK3-206ENST00000611833 TRBV5-4A0A0C4DH59 114 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 LOC730098B7Z3J9 87 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 SPAM1P38567 509 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 ATN1P54259 1190 aaPredicted RBP16.88■□□□□ 0.29
NEK3-206ENST00000611833 CYP4F3Q08477 520 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 PMS2P3Q13401 168 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 TTLL9Q3SXZ7 439 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 CCNYL2Q5T2Q4 361 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 DNAJC14Q6Y2X3 702 aaPredicted RBP16.88■□□□□ 0.29
NEK3-206ENST00000611833 MACC1Q6ZN28 852 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 TMCO2Q7Z6W1 182 aaPredicted RBP16.88■□□□□ 0.29
NEK3-206ENST00000611833 GLB1L3Q8NCI6 653 aaPredicted RBP16.88■□□□□ 0.29
NEK3-206ENST00000611833 FBXO30Q8TB52 745 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 C12orf43Q96C57 262 aaKnown RBP16.88■□□□□ 0.29
NEK3-206ENST00000611833 SDCCAG3Q96C92 435 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 PHF12Q96QT6 1004 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 HTATIP2Q9BUP3 242 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 YTHDF1Q9BYJ9 559 aaKnown RBP16.88■□□□□ 0.29
NEK3-206ENST00000611833 TNKS2Q9H2K2 1166 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 POLR1BQ9H9Y6 1135 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 LIMD1Q9UGP4 676 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 CDC14AQ9UNH5 594 aa16.88■□□□□ 0.29
NEK3-206ENST00000611833 WDR47O94967 919 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 GNRH1P01148 92 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 IL6P05231 212 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 EBLN1P0CF75 366 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 MAPK8P45983 427 aa16.87■□□□□ 0.29
NEK3-206ENST00000611833 YAP1P46937 504 aaKnown RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms