RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 TRIM55Q9BYV6 548 aa16.51■□□□□ 0.23
SCAF1-204ENST00000601038 TFB2MQ9H5Q4 396 aaKnown RBP16.51■□□□□ 0.23
SCAF1-204ENST00000601038 MVB12BQ9H7P6 319 aa16.51■□□□□ 0.23
SCAF1-204ENST00000601038 NLE1Q9NVX2 485 aaPredicted RBP16.51■□□□□ 0.23
SCAF1-204ENST00000601038 GSAPA4D1B5 854 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 GOLGA6L9A6NEM1 432 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 MEN1O00255 615 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 BTN3A3O00478 584 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 DNAJB5O75953 348 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 GSTM1P09488 218 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 MSL3P1P0C860 447 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 SPTBP11277 2137 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 TPH1P17752 444 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 VAV2P52735 878 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 GSTM4Q03013 218 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 PRAMEF17Q5VTA0 474 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 RAD9BQ6WBX8 426 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 TAS2R42Q7RTR8 314 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 DSELQ8IZU8 1212 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 FAM71DQ8N9W8 422 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 PHC3Q8NDX5 983 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 MIB2Q96AX9 1013 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 CDKN2AIPNLQ96HQ2 116 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 PITPNM3Q9BZ71 974 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 CHST8Q9H2A9 424 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 LRRC40Q9H9A6 602 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 AMFRQ9UKV5 643 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 PLAAQ9Y263 795 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 DOPEY2Q9Y3R5 2298 aa16.5■□□□□ 0.23
SCAF1-204ENST00000601038 UBR5O95071 2799 aaPredicted RBP16.49■□□□□ 0.23
SCAF1-204ENST00000601038 CLEC18AA5D8T8 446 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 BTN3A1O00481 513 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 SEC16AO15027 2179 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 MAP3K7O43318 606 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 METTL18O95568 372 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 PDGFAP04085 211 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 PTMAP06454 111 aaKnown RBP16.49■□□□□ 0.23
SCAF1-204ENST00000601038 RAB40ALP0C0E4 278 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 PDHA2P29803 388 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 PREPP48147 710 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 CD97P48960 835 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 ZNF75DP51815 510 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 CACNG1Q06432 222 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 SRSF1Q07955 248 aaKnown RBP eCLIP16.49■□□□□ 0.23
SCAF1-204ENST00000601038 ABRQ12979 859 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 IL10RAQ13651 578 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 P3H1Q32P28 736 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 CLEC18BQ6UXF7 455 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 AMIGO1Q86WK6 493 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 CLDN19Q8N6F1 224 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 UBL4BQ8N7F7 174 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 CLEC18CQ8NCF0 446 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 OR52E1Q8NGJ3 308 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 STYXQ8WUJ0 223 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 TFGQ92734 400 aaPredicted RBP16.49■□□□□ 0.23
SCAF1-204ENST00000601038 CLIP3Q96DZ5 547 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 ANKMY1Q9P2S6 941 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 SERTAD3Q9UJW9 196 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 PCDHGA9Q9Y5G4 932 aaKnown RBP16.49■□□□□ 0.23
SCAF1-204ENST00000601038 HECTD1Q9ULT8 2610 aa16.49■□□□□ 0.23
SCAF1-204ENST00000601038 TMEM150CB9EJG8 249 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 DDX3YO15523 660 aaKnown RBP16.48■□□□□ 0.23
SCAF1-204ENST00000601038 PSMD3O43242 534 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 AP2A2O94973 939 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 ST6GAL1P15907 406 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 PSMA3P25788 255 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 RORAP35398 523 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 MLLT10P55197 1068 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 BOP1Q14137 746 aaKnown RBP16.48■□□□□ 0.23
SCAF1-204ENST00000601038 ZNF789Q5FWF6 425 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 LCN10Q6JVE6 187 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 PEX26Q7Z412 305 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 PIANPQ8IYJ0 282 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 ADGRF3Q8IZF5 1079 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 ACRBPQ8NEB7 543 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 OR1L3Q8NH93 324 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 ADAMTS17Q8TE56 1095 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 TRAPPC9Q96Q05 1148 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 NRTNQ99748 197 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 SLC25A23Q9BV35 468 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 NLNQ9BYT8 704 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 ING2Q9H160 280 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 MLXIPLQ9NP71 852 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 ACSS2Q9NR19 701 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 PIKFYVEQ9Y2I7 2098 aa16.48■□□□□ 0.23
SCAF1-204ENST00000601038 MROH6A6NGR9 719 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 C2orf74A8MZ97 194 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 MIF4GDA9UHW6 222 aaKnown RBP16.47■□□□□ 0.23
SCAF1-204ENST00000601038 LIN7AO14910 233 aaPredicted RBP16.47■□□□□ 0.23
SCAF1-204ENST00000601038 AP2A1O95782 977 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 PRSS56P0CW18 603 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 CYP2A7P20853 494 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 PRKG2Q13237 762 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 KLF1Q13351 362 aaPredicted RBP16.47■□□□□ 0.23
SCAF1-204ENST00000601038 POU6F1Q14863 301 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 DBN1Q16643 649 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 CPZQ66K79 652 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 MICALCLQ6ZW33 695 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 KIAA1328Q86T90 577 aa16.47■□□□□ 0.23
SCAF1-204ENST00000601038 ATCAYQ86WG3 371 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms