RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 ITPR1Q14643 2758 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 UBA6A0AVT1 1052 aaPredicted RBP19■□□□□ 0.63
SHKBP1-221ENST00000599833 DXOO77932 396 aaKnown RBP19■□□□□ 0.63
SHKBP1-221ENST00000599833 UBXN7O94888 489 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 MPOP05164 745 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 PROS1P07225 676 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 PKMP14618 531 aaKnown RBP19■□□□□ 0.63
SHKBP1-221ENST00000599833 TYRP1P17643 537 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 MPSTP25325 297 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 ECHS1P30084 290 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 CAPZBP47756 277 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 CLCN7P51798 805 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 CALCOCO2Q13137 446 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 PTRHD1Q6GMV3 140 aaKnown RBP19■□□□□ 0.63
SHKBP1-221ENST00000599833 ARHGAP22Q7Z5H3 698 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 OTUD6BQ8N6M0 293 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 RCBTB1Q8NDN9 531 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 PHC3Q8NDX5 983 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 CFAP36Q96G28 342 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 DPYSL5Q9BPU6 564 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 FAM167BQ9BTA0 163 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 MCMBPQ9BTE3 642 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 MENTQ9BUN1 341 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 RAB33BQ9H082 229 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 PCDHGA8Q9Y5G5 932 aa19■□□□□ 0.63
SHKBP1-221ENST00000599833 SNRNP200O75643 2136 aaKnown RBP19■□□□□ 0.63
SHKBP1-221ENST00000599833 CCDC187A0A096LP49 1063 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 NDC80O14777 642 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 EIF3HO15372 352 aaKnown RBP eCLIP18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 AHSGP02765 367 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 LSSP48449 732 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 PLTPP55058 493 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 PLOD1Q02809 727 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 GUCY2DQ02846 1103 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 CYP4F3Q08477 520 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 THOC5Q13769 683 aaKnown RBP18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 GRB7Q14451 532 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 C3orf38Q5JPI3 329 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 GALNT7Q86SF2 657 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 RASGRP3Q8IV61 690 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 OR5AR1Q8NGP9 310 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 CALML6Q8TD86 181 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 NCSTNQ92542 709 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 TFGQ92734 400 aaPredicted RBP18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 NXPE2Q96DL1 559 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 POLR1BQ9H9Y6 1135 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 SMYD2Q9NRG4 433 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 SEMA5BQ9P283 1151 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 EPHA6Q9UF33 1036 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 NBEAQ8NFP9 2946 aa18.99■□□□□ 0.63
SHKBP1-221ENST00000599833 CTAGE15A4D2H0 777 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 ZW10O43264 779 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 BRINP1O60477 761 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 CTAGE8P0CG41 777 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 HGFP14210 728 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 ETV5P41161 510 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 MAPK9P45984 424 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 CSE1LP55060 971 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 GPX6P59796 221 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 GABREP78334 506 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 HSPA14Q0VDF9 509 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 CTAGE6Q86UF2 777 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 CTAGE4Q8IX94 777 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 ZBED8Q8IZ13 594 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 OR52E1Q8NGJ3 308 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 WDR36Q8NI36 951 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 ASZ1Q8WWH4 475 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 FAM136AQ96C01 138 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 PANX3Q96QZ0 392 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 AARSD1Q9BTE6 412 aaKnown RBP18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 MVB12BQ9H7P6 319 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 SAYSD1Q9NPB0 183 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 HEBP2Q9Y5Z4 205 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 PSAT1Q9Y617 370 aa18.98■□□□□ 0.63
SHKBP1-221ENST00000599833 PKD1L2Q7Z442 2459 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 CDRT15L2A8MXV6 281 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 H3BMM5 538 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 TMX2-CTNND1H3BSU7 103 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 CAPN5O15484 640 aaPredicted RBP18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 TLX3O43711 291 aaPredicted RBP18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 KIF1CO43896 1103 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 CARSP49589 748 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 CAV1Q03135 178 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 TRA2AQ13595 282 aaKnown RBP eCLIP18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 SYTL3Q4VX76 610 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 PLEKHS1Q5SXH7 462 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 KIAA0408Q6ZU52 694 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 BMPERQ8N8U9 685 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 MNS1Q8NEH6 495 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 ACVR1CQ8NER5 493 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 OR5K2Q8NHB8 316 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 GSDMBQ8TAX9 411 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 KCNJ9Q92806 393 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 TMEM159Q96B96 161 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 AHCYL2Q96HN2 611 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 C9orf72Q96LT7 481 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 FERD3LQ96RJ6 166 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 TSSK1BQ9BXA7 367 aa18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 TFB2MQ9H5Q4 396 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-221ENST00000599833 L2HGDHQ9H9P8 463 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms