RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 TAF4O00268 1085 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 CPNE6O95741 557 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 CAPNS1P04632 268 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 HOXB3P14651 431 aaPredicted RBP11.82□□□□□ -0.52
ZNF548-209ENST00000598895 IVDP26440 423 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 CSF2RBP32927 897 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 SLC19A1P41440 591 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 HALP42357 657 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 NPY2RP49146 381 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 UBE2IP63279 158 aaKnown RBP11.82□□□□□ -0.52
ZNF548-209ENST00000598895 LAMB3Q13751 1172 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 NR1D2Q14995 579 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 RASA2Q15283 850 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 BCL7AQ4VC05 210 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 FASTKD1Q53R41 847 aaKnown RBP11.82□□□□□ -0.52
ZNF548-209ENST00000598895 SNAP47Q5SQN1 464 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 IZUMO3Q5VZ72 239 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 CASC4Q6P4E1 433 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 LRRC8BQ6P9F7 803 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 AFTPHQ6ULP2 937 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 ABRAXAS1Q6UWZ7 409 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 ZNF574Q6ZN55 896 aaPredicted RBP11.82□□□□□ -0.52
ZNF548-209ENST00000598895 PIM3Q86V86 326 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 TDRPQ86YL5 185 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 CFAP206Q8IYR0 622 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 KDF1Q8NAX2 398 aaPredicted RBP11.82□□□□□ -0.52
ZNF548-209ENST00000598895 RCBTB1Q8NDN9 531 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 SPDYE1Q8NFV5 336 aaPredicted RBP11.82□□□□□ -0.52
ZNF548-209ENST00000598895 GPR150Q8NGU9 434 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 OR4L1Q8NH43 312 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 FBF1Q8TES7 1133 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 ZNF514Q96K75 400 aaPredicted RBP11.82□□□□□ -0.52
ZNF548-209ENST00000598895 ANKRD27Q96NW4 1050 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 C19orf43Q9BQ61 176 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 PHACTR1Q9C0D0 580 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 IL22Q9GZX6 179 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 CXorf56Q9H5V9 222 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 TXLNGQ9NUQ3 528 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 IMP3Q9NV31 184 aaKnown RBP11.82□□□□□ -0.52
ZNF548-209ENST00000598895 MARCH4Q9P2E8 410 aaPredicted RBP11.82□□□□□ -0.52
ZNF548-209ENST00000598895 KLHL3Q9UH77 587 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 RAXQ9Y2V3 346 aa11.82□□□□□ -0.52
ZNF548-209ENST00000598895 IGLV3-16A0A075B6K0 115 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 CCDC187A0A096LP49 1063 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 OR5K4A6NMS3 321 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 A8MU76 341 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 GOLGA8TH3BQL2 631 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 ZW10O43264 779 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 OR1I1O60431 355 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 WFS1O76024 890 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 TYRP1P17643 537 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 ITGB6P18564 788 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 XRCC1P18887 633 aaPredicted RBP11.81□□□□□ -0.52
ZNF548-209ENST00000598895 PSMA3P25788 255 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 GPR3P46089 330 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 PRLHRP49683 370 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 SARNPP82979 210 aaKnown RBP11.81□□□□□ -0.52
ZNF548-209ENST00000598895 CDK16Q00536 496 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 CFHR1Q03591 330 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 ACVR1Q04771 509 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 DMPKQ09013 629 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 BNIP1Q12981 228 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 RTP5Q14D33 572 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 KYNUQ16719 465 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 SPRED3Q2MJR0 410 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 XKR5Q6UX68 686 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 NAPRTQ6XQN6 538 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 NLRP9Q7RTR0 991 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 CAND1Q86VP6 1230 aaKnown RBP11.81□□□□□ -0.52
ZNF548-209ENST00000598895 PROSER1Q86XN7 944 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 OR2L2Q8NH16 312 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 OR10G6Q8NH81 332 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 HEXDCQ8WVB3 486 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 NCSTNQ92542 709 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.81□□□□□ -0.52
ZNF548-209ENST00000598895 SH3KBP1Q96B97 665 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 MFSD3Q96ES6 412 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 RSRC1Q96IZ7 334 aaKnown RBP11.81□□□□□ -0.52
ZNF548-209ENST00000598895 CCDC74BQ96LY2 380 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 TMEM74Q96NL1 305 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 DCBLD2Q96PD2 775 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 INSM2Q96T92 566 aaPredicted RBP11.81□□□□□ -0.52
ZNF548-209ENST00000598895 STRADBQ9C0K7 418 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 POLR1BQ9H9Y6 1135 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 CATSPERZQ9NTU4 200 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 FGFR1OP2Q9NVK5 253 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 BAIAP2L1Q9UHR4 511 aa11.81□□□□□ -0.52
ZNF548-209ENST00000598895 DNMT3AQ9Y6K1 912 aaPredicted RBP11.81□□□□□ -0.52
ZNF548-209ENST00000598895 KIF26BQ2KJY2 2108 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 IGHV5-10-1A0A0J9YXX1 117 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 SMAPO00193 183 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 AP3B1O00203 1094 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 DNALI1O14645 258 aaPredicted RBP11.8□□□□□ -0.52
ZNF548-209ENST00000598895 TLX3O43711 291 aaPredicted RBP11.8□□□□□ -0.52
ZNF548-209ENST00000598895 DUX1O43812 170 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 KIF1CO43896 1103 aaKnown RBP11.8□□□□□ -0.52
ZNF548-209ENST00000598895 KCNJ13O60928 360 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 UBOX5O94941 541 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 VAPBO95292 243 aa11.8□□□□□ -0.52
ZNF548-209ENST00000598895 SLC35G4P0C7Q5 338 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms