RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 NAF1Q96HR8 494 aaKnown RBP16.29■□□□□ 0.2
SSBP4-204ENST00000597724 BIRC8Q96P09 236 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 DPH1Q9BZG8 443 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 HRASLS2Q9NWW9 162 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 IL1RAPL1Q9NZN1 696 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 GNPTGQ9UJJ9 305 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 CDYLQ9Y232 598 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 PCDHGA3Q9Y5H0 932 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 FAM169AQ9Y6X4 670 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 AHCTF1Q8WYP5 2266 aa16.29■□□□□ 0.2
SSBP4-204ENST00000597724 OR6C74A6NCV1 312 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 OR5K3A6NET4 321 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 SMAPO00193 183 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 SEC31AO94979 1220 aaKnown RBP16.28■□□□□ 0.2
SSBP4-204ENST00000597724 EIF3BP55884 814 aaKnown RBP16.28■□□□□ 0.2
SSBP4-204ENST00000597724 PPP1CAP62136 330 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 MC2RQ01718 297 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 DHX9Q08211 1270 aaKnown RBP16.28■□□□□ 0.2
SSBP4-204ENST00000597724 HSPA14Q0VDF9 509 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 THOC5Q13769 683 aaKnown RBP16.28■□□□□ 0.2
SSBP4-204ENST00000597724 LONRF1Q17RB8 773 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 CTSL3PQ5NE16 218 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 HIBCHQ6NVY1 386 aaPredicted RBP16.28■□□□□ 0.2
SSBP4-204ENST00000597724 C19orf48Q6RUI8 117 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 FAM92BQ6ZTR7 304 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 PRSS42Q7Z5A4 293 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 OOSP2Q86WS3 158 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 SPACA3Q8IXA5 215 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 SLC22A15Q8IZD6 547 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 KRT222Q8N1A0 295 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 OR4E2Q8NGC2 313 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 OR52E1Q8NGJ3 308 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 PANX3Q96QZ0 392 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 EBNA1BP2Q99848 306 aaKnown RBP16.28■□□□□ 0.2
SSBP4-204ENST00000597724 ZNF768Q9H5H4 540 aaKnown RBP16.28■□□□□ 0.2
SSBP4-204ENST00000597724 TFB2MQ9H5Q4 396 aaKnown RBP16.28■□□□□ 0.2
SSBP4-204ENST00000597724 FBXO8Q9NRD0 319 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 SLC39A1Q9NY26 324 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 FOXJ2Q9P0K8 574 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 SEMA5BQ9P283 1151 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 ASF1AQ9Y294 204 aa16.28■□□□□ 0.2
SSBP4-204ENST00000597724 EFCAB8A8MWE9 144 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 TP73O15350 636 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 BANF1O75531 89 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 RASSF9O75901 435 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 S1PR4O95977 384 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 APOA4P06727 396 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 PGAM1P18669 254 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 FMO4P31512 558 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 ABCG1P45844 678 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 SEPHS1P49903 392 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 CSE1LP55060 971 aaKnown RBP16.27■□□□□ 0.2
SSBP4-204ENST00000597724 TLE3Q04726 772 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 PRKG2Q13237 762 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 DNAJC21Q5F1R6 531 aaKnown RBP16.27■□□□□ 0.2
SSBP4-204ENST00000597724 ZNF789Q5FWF6 425 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 CACHD1Q5VU97 1274 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 VRK3Q8IV63 474 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 TBC1D21Q8IYX1 336 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.27■□□□□ 0.26e-6■■■■■ 47.7
SSBP4-204ENST00000597724 OR5AR1Q8NGP9 310 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 LCN9Q8WX39 176 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 KLHL6Q8WZ60 621 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 PMEPA1Q969W9 287 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 SNF8Q96H20 258 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 DDA1Q9BW61 102 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 ASPSCR1Q9BZE9 553 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 TRIM31Q9BZY9 425 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 SRMSQ9H3Y6 488 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 C20orf96Q9NUD7 363 aaPredicted RBP16.27■□□□□ 0.2
SSBP4-204ENST00000597724 INTS10Q9NVR2 710 aaKnown RBP16.27■□□□□ 0.2
SSBP4-204ENST00000597724 SIDT1Q9NXL6 827 aaKnown RBP16.27■□□□□ 0.2
SSBP4-204ENST00000597724 VPS9D1Q9Y2B5 631 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 SSUH2Q9Y2M2 353 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 CRYL1Q9Y2S2 319 aa16.27■□□□□ 0.2
SSBP4-204ENST00000597724 ADAMTS20P59510 1910 aa16.27■□□□□ 0.19
SSBP4-204ENST00000597724 IGHV5-51A0A0C4DH38 117 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 H3BMM5 538 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 KPNA5O15131 536 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 KLK10O43240 276 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 SLCO2B1O94956 709 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 ESR1P03372 595 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 POLR2CP19387 275 aaPredicted RBP16.26■□□□□ 0.19
SSBP4-204ENST00000597724 ITGA8P53708 1063 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 RAB15P59190 212 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 CRYMQ14894 314 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 TMED2Q15363 201 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 COL28A1Q2UY09 1125 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 BBS9Q3SYG4 887 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 DCAF12Q5T6F0 453 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 ZNF470Q6ECI4 717 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 MAATS1Q7Z4T9 603 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 IGDCC3Q8IVU1 814 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 DENND6AQ8IWF6 608 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 LMNTD2Q8IXW0 634 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 PDIK1LQ8N165 341 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 OR5K2Q8NHB8 316 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 UBXN4Q92575 508 aa16.26■□□□□ 0.19
SSBP4-204ENST00000597724 C16orf45Q96MC5 204 aaPredicted RBP16.26■□□□□ 0.19
SSBP4-204ENST00000597724 PWWP2AQ96N64 755 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms