RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 TMEM63AO94886 807 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 MGAT1P26572 445 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 FNTAP49354 379 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 ATP1A2P50993 1020 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 TERF1P54274 439 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 BOP1Q14137 746 aaKnown RBP14.71□□□□□ -0.05
TRIM28-205ENST00000595028 KRT33BQ14525 404 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 DNTTIP2Q5QJE6 756 aaKnown RBP14.71□□□□□ -0.05
TRIM28-205ENST00000595028 ZNF449Q6P9G9 518 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 CCDC137Q6PK04 289 aaKnown RBP14.71□□□□□ -0.05
TRIM28-205ENST00000595028 ACVR1CQ8NER5 493 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 KLHL6Q8WZ60 621 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 UBXN4Q92575 508 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 CD180Q99467 661 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 KIFC1Q9BW19 673 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 MVB12BQ9H7P6 319 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 SEMA5BQ9P283 1151 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 MARCH4Q9P2E8 410 aaPredicted RBP14.71□□□□□ -0.05
TRIM28-205ENST00000595028 NEU2Q9Y3R4 380 aa14.71□□□□□ -0.05
TRIM28-205ENST00000595028 F8W8V4 182 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 POLR1CO15160 346 aaPredicted RBP14.7□□□□□ -0.06
TRIM28-205ENST00000595028 EFSO43281 561 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 RAD1O60671 282 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 NELFEP18615 380 aaKnown RBP14.7□□□□□ -0.06
TRIM28-205ENST00000595028 NMBRP28336 390 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 PPARGP37231 505 aaPredicted RBP14.7□□□□□ -0.06
TRIM28-205ENST00000595028 SH3BP2P78314 561 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 FOXM1Q08050 763 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 SYTL3Q4VX76 610 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 COLEC12Q5KU26 742 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 ANKRD22Q5VYY1 191 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 ARMC3Q5W041 872 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 PRICKLE2Q7Z3G6 844 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 LDB1Q86U70 411 aaPredicted RBP14.7□□□□□ -0.06
TRIM28-205ENST00000595028 MPP5Q8N3R9 675 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 CPT1BQ92523 772 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 NKD1Q969G9 470 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 MED8Q96G25 268 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 SLC41A2Q96JW4 573 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 HGH1Q9BTY7 390 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 HRASLS2Q9NWW9 162 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 ANAPC5Q9UJX4 755 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 SOX13Q9UN79 622 aa14.7□□□□□ -0.06
TRIM28-205ENST00000595028 TMEM184BQ9Y519 407 aaPredicted RBP14.7□□□□□ -0.06
TRIM28-205ENST00000595028 IGHV5-51A0A0C4DH38 117 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 SLC5A10A0PJK1 596 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 OR6C74A6NCV1 312 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 ZNF185O15231 689 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 CD3EAPO15446 510 aaKnown RBP14.69□□□□□ -0.06
TRIM28-205ENST00000595028 DLGAP3O95886 979 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 ARNTP27540 789 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 TTPAP49638 278 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 SARNPP82979 210 aaKnown RBP14.69□□□□□ -0.06
TRIM28-205ENST00000595028 CACNA2D3Q8IZS8 1091 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 OR52E1Q8NGJ3 308 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 LKAAEAR1Q8TD35 194 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 GRK7Q8WTQ7 553 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 LCN9Q8WX39 176 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 TFGQ92734 400 aaPredicted RBP14.69□□□□□ -0.06
TRIM28-205ENST00000595028 MFSD3Q96ES6 412 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 OR6C1Q96RD1 312 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 FERD3LQ96RJ6 166 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 MAP3K3Q99759 626 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 SPRY4Q9C004 299 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 XAB2Q9HCS7 855 aaKnown RBP14.69□□□□□ -0.06
TRIM28-205ENST00000595028 IL17BQ9UHF5 180 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 PILRAQ9UKJ1 303 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 POMT2Q9UKY4 750 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 PCDHGA4Q9Y5G9 962 aa14.69□□□□□ -0.06
TRIM28-205ENST00000595028 MYO9AB2RTY4 2548 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 BSNQ9UPA5 3926 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 MATN2O00339 956 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 PRMT5O14744 637 aaPredicted RBP14.68□□□□□ -0.06
TRIM28-205ENST00000595028 AVILO75366 819 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 STK17BO94768 372 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 NTRK1P04629 796 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 MLNP12872 115 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 TCP1P17987 556 aaKnown RBP14.68□□□□□ -0.06
TRIM28-205ENST00000595028 ITGB6P18564 788 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 WT1P19544 449 aaPredicted RBP14.68□□□□□ -0.06
TRIM28-205ENST00000595028 ACADLP28330 430 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 ARCN1P48444 511 aaKnown RBP14.68□□□□□ -0.06
TRIM28-205ENST00000595028 PLOD1Q02809 727 aaPredicted RBP14.68□□□□□ -0.06
TRIM28-205ENST00000595028 PRKAA1Q13131 559 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 IL11RAQ14626 422 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 KIAA1614Q5VZ46 1190 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 KIAA0930Q6ICG6 404 aaPredicted RBP14.68□□□□□ -0.06
TRIM28-205ENST00000595028 ARMC6Q6NXE6 501 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 CES3Q6UWW8 571 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 NAPRTQ6XQN6 538 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 CAND1Q86VP6 1230 aaKnown RBP14.68□□□□□ -0.06
TRIM28-205ENST00000595028 KMT5CQ86Y97 462 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 NLGN4XQ8N0W4 816 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 CARFQ8N187 725 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 OTUD6BQ8N6M0 293 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 IL22RA1Q8N6P7 574 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 MCUQ8NE86 351 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 NLGN4YQ8NFZ3 816 aaPredicted RBP14.68□□□□□ -0.06
TRIM28-205ENST00000595028 OR4E2Q8NGC2 313 aa14.68□□□□□ -0.06
TRIM28-205ENST00000595028 TSSK1BQ9BXA7 367 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms