RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 HACD3Q9P035 362 aa15.14■□□□□ 0.01
PNKP-204ENST00000594661 CFLARO15519 480 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 KCNH1O95259 989 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 GOT2P00505 430 aaKnown RBP15.13■□□□□ 0.01
PNKP-204ENST00000594661 MSL3P1P0C860 447 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 CES1P23141 567 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 ATXN3P54252 364 aaPredicted RBP15.13■□□□□ 0.01
PNKP-204ENST00000594661 RAD23AP54725 363 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 RHOAP61586 193 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 ECT2LQ008S8 904 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 MERTKQ12866 999 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 LMAN2Q12907 356 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 PRKAA1Q13131 559 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 NEDD8Q15843 81 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 FAM83EQ2M2I3 478 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 MPPE1Q53F39 396 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 LDLRAP1Q5SW96 308 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 NCEH1Q6PIU2 408 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 ABRAXAS1Q6UWZ7 409 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 MFSD4AQ8N468 514 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 CCNYL1Q8N7R7 359 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 MDGA1Q8NFP4 955 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 SNX19Q92543 992 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 PPP1R36Q96LQ0 422 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 NOL11Q9H8H0 719 aaKnown RBP15.13■□□□□ 0.01
PNKP-204ENST00000594661 TCF7L2Q9NQB0 619 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 IGSF5Q9NSI5 407 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 CNOT6Q9ULM6 557 aaKnown RBP15.13■□□□□ 0.01
PNKP-204ENST00000594661 ARIH1Q9Y4X5 557 aaPredicted RBP15.13■□□□□ 0.01
PNKP-204ENST00000594661 GRXCR1A8MXD5 290 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 HDAC3O15379 428 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 RPP40O75818 363 aaKnown RBP15.13■□□□□ 0.01
PNKP-204ENST00000594661 RHOP08100 348 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 ENO3P13929 434 aaPredicted RBP15.13■□□□□ 0.01
PNKP-204ENST00000594661 CKMT2P17540 419 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 ENPP1P22413 925 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 CD70P32970 193 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 ETV3P41162 512 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 ZNF140P52738 457 aaPredicted RBP15.13■□□□□ 0.01
PNKP-204ENST00000594661 NTHL1P78549 312 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 SELPLGQ14242 412 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 TRIM25Q14258 630 aaKnown RBP15.13■□□□□ 0.01
PNKP-204ENST00000594661 PTPRRQ15256 657 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 CRY1Q16526 586 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 HECTD2Q5U5R9 776 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 SEL1L3Q68CR1 1132 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 SLC22A16Q86VW1 577 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 RALGPS2Q86X27 583 aaPredicted RBP15.13■□□□□ 0.01
PNKP-204ENST00000594661 LACC1Q8IV20 430 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 CMTM8Q8IZV2 173 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 ASCC1Q8N9N2 400 aaKnown RBP15.13■□□□□ 0.01
PNKP-204ENST00000594661 PEX13Q92968 403 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 TSPAN17Q96FV3 270 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 OR52B2Q96RD2 323 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 TCF12Q99081 682 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 ZNF385DQ9H6B1 395 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 MRPL40Q9NQ50 206 aaKnown RBP15.13■□□□□ 0.01
PNKP-204ENST00000594661 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.13■□□□□ 0.01
PNKP-204ENST00000594661 ZDHHC2Q9UIJ5 367 aa15.13■□□□□ 0.01
PNKP-204ENST00000594661 EIF3LQ9Y262 564 aaKnown RBP15.13■□□□□ 0.01
PNKP-204ENST00000594661 NOTCH4Q99466 2003 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 C5orf67F2Z3F1 127 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 STX16-NPEPL1H3BU86 382 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 NEMP1O14524 444 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 ARHGAP33O14559 1287 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 SMAD6O43541 496 aaKnown RBP15.12■□□□□ 0.01
PNKP-204ENST00000594661 S1PR4O95977 384 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 SLC4A1P02730 911 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 C7P10643 843 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 CDH1P12830 882 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 PFKLP17858 780 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 TFEBP19484 476 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 UBE3AQ05086 875 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 TRAP1Q12931 704 aaKnown RBP15.12■□□□□ 0.01
PNKP-204ENST00000594661 SEMA3AQ14563 771 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 MPP7Q5T2T1 576 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 AGAP9Q5VTM2 703 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 FAM109BQ6ICB4 259 aaPredicted RBP15.12■□□□□ 0.01
PNKP-204ENST00000594661 GLT6D1Q7Z4J2 308 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 GALNT7Q86SF2 657 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 TXNDC5Q8NBS9 432 aaKnown RBP15.12■□□□□ 0.01
PNKP-204ENST00000594661 OSCP1Q8WVF1 389 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 C2orf49Q9BVC5 232 aaPredicted RBP15.12■□□□□ 0.01
PNKP-204ENST00000594661 TM6SF2Q9BZW4 377 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 POMKQ9H5K3 350 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 CCDC177Q9NQR7 707 aaPredicted RBP15.12■□□□□ 0.01
PNKP-204ENST00000594661 RWDD3Q9Y3V2 267 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 PCDHGA8Q9Y5G5 932 aa15.12■□□□□ 0.01
PNKP-204ENST00000594661 DEAF1O75398 565 aaPredicted RBP15.11■□□□□ 0.01
PNKP-204ENST00000594661 PRSS56P0CW18 603 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 BMP1P13497 986 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 ATP5F1P24539 256 aaPredicted RBP15.11■□□□□ 0.01
PNKP-204ENST00000594661 S100A5P33763 92 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 HK2P52789 917 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 COPZ1P61923 177 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 PPP2R2BQ00005 443 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 EIF2B5Q13144 721 aaKnown RBP15.11■□□□□ 0.01
PNKP-204ENST00000594661 NPTX1Q15818 432 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 ZNF697Q5TEC3 545 aa15.11■□□□□ 0.01
PNKP-204ENST00000594661 ZNF773Q6PK81 442 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms