RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 KLHL33A6NCF5 533 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 NPEPPSL1A6NEC2 478 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 NEMP2A6NFY4 417 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 A8MT66 165 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 FPGTO14772 594 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 LIN7AO14910 233 aaPredicted RBP13.19□□□□□ -0.3
VMP1-217ENST00000593168 KHNYNO15037 678 aaKnown RBP13.19□□□□□ -0.3
VMP1-217ENST00000593168 SLC16A5O15375 505 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 NPHS1O60500 1241 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 POP7O75817 140 aaKnown RBP13.19□□□□□ -0.3
VMP1-217ENST00000593168 SNUPNO95149 360 aaKnown RBP13.19□□□□□ -0.3
VMP1-217ENST00000593168 TGDSO95455 350 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 CEACAM1P13688 526 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 IMPDH1P20839 514 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 BCKDHBP21953 392 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 SERPINB5P36952 375 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 SLC1A6P48664 564 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 ABCE1P61221 599 aaKnown RBP13.19□□□□□ -0.3
VMP1-217ENST00000593168 NAA20P61599 178 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 ZNF658BQ4V348 819 aaPredicted RBP13.19□□□□□ -0.3
VMP1-217ENST00000593168 CES4AQ5XG92 561 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 KIAA0895LQ68EN5 471 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 SBSNQ6UWP8 590 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 NAPRTQ6XQN6 538 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 ZCCHC23Q6ZST2 131 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 FAM47EQ6ZV65 393 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 GPSM1Q86YR5 675 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 TRAPPC5Q8IUR0 188 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 ZNF547Q8IVP9 402 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 GLMNQ92990 594 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 TOE1Q96GM8 510 aaKnown RBP13.19□□□□□ -0.3
VMP1-217ENST00000593168 APOOQ9BUR5 198 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 SCNM1Q9BWG6 230 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 DRC3Q9H069 523 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 FAM107BQ9H098 131 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 RABEP2Q9H5N1 569 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 RMI1Q9H9A7 625 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 RDH14Q9HBH5 336 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 NCKIPSDQ9NZQ3 722 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 CYP8B1Q9UNU6 501 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 DMTF1Q9Y222 760 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 CDYLQ9Y232 598 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 TMEM98Q9Y2Y6 226 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 HS3ST3A1Q9Y663 406 aa13.19□□□□□ -0.3
VMP1-217ENST00000593168 ADAMTS9Q9P2N4 1935 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 MGAT4DA6NG13 374 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 STX16-NPEPL1H3BU86 382 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 UBXN8O00124 270 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 CACNB4O00305 520 aaPredicted RBP13.18□□□□□ -0.3
VMP1-217ENST00000593168 TOR1BO14657 336 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 STX16O14662 325 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 SNX3O60493 162 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 C8GP07360 202 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 ENO2P09104 434 aaPredicted RBP13.18□□□□□ -0.3
VMP1-217ENST00000593168 CSRP1P21291 193 aaKnown RBP13.18□□□□□ -0.3
VMP1-217ENST00000593168 AKT2P31751 481 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 MAPK9P45984 424 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 NAGLUP54802 743 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 SP140Q13342 867 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 BOP1Q14137 746 aaKnown RBP13.18□□□□□ -0.3
VMP1-217ENST00000593168 GKAP1Q5VSY0 366 aaPredicted RBP13.18□□□□□ -0.3
VMP1-217ENST00000593168 RAB44Q7Z6P3 723 aaPredicted RBP13.18□□□□□ -0.3
VMP1-217ENST00000593168 CRLF3Q8IUI8 442 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 RASGRP3Q8IV61 690 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 FBXO39Q8N4B4 442 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 DEFB124Q8NES8 71 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 OR2L2Q8NH16 312 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 PPP4R1Q8TF05 950 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 TMEM159Q96B96 161 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 L3HYPDHQ96EM0 354 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 CNDP1Q96KN2 507 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 C1QTNF3Q9BXJ4 246 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 C20orf27Q9GZN8 174 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 C6orf106Q9H6K1 298 aaPredicted RBP13.18□□□□□ -0.3
VMP1-217ENST00000593168 NUDT4Q9NZJ9 180 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 GULP1Q9UBP9 304 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 SLC17A4Q9Y2C5 497 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 OARD1Q9Y530 152 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 OR1A2Q9Y585 309 aa13.18□□□□□ -0.3
VMP1-217ENST00000593168 IGHV1OR15-9A0A0B4J2B8 117 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 TMEM8BA6NDV4 472 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 SUPT3HB4E1H0 165 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 GFYI3L273 518 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 GRID2O43424 1007 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 ITM2AO43736 263 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 KCNJ13O60928 360 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 SUPT3HO75486 399 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 IGHV4-34P06331 123 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 GFAPP14136 432 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 KELP23276 732 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 HK3P52790 923 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 ALDH18A1P54886 795 aaKnown RBP13.17□□□□□ -0.3
VMP1-217ENST00000593168 KIAA1024LP59773 190 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 PFN3P60673 137 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 YPEL5P62699 121 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 HERVK_113P63132 956 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 GALNT1Q10472 559 aaPredicted RBP13.17□□□□□ -0.3
VMP1-217ENST00000593168 RPA4Q13156 261 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 RCN2Q14257 317 aa13.17□□□□□ -0.3
VMP1-217ENST00000593168 TGFBIQ15582 683 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms