RNA–Protein interactions for RNA: ENST00000592632.5

DDX39A-218, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-218ENST00000592632 CKAP4Q07065 602 aaKnown RBP12.66□□□□□ -0.38
DDX39A-218ENST00000592632 EIF3IQ13347 325 aaKnown RBP12.66□□□□□ -0.38
DDX39A-218ENST00000592632 BOP1Q14137 746 aaKnown RBP12.66□□□□□ -0.38
DDX39A-218ENST00000592632 HIF1AQ16665 826 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 HSP90AA5PQ58FG0 334 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 SPANXN3Q5MJ09 141 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 SNAP47Q5SQN1 464 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 RNF187Q5TA31 235 aaPredicted RBP12.66□□□□□ -0.38
DDX39A-218ENST00000592632 ZNF470Q6ECI4 717 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 FOXR1Q6PIV2 292 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 UNC5AQ6ZN44 842 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 PLXDC1Q8IUK5 500 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 LSMEM2Q8N112 164 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 BBOF1Q8ND07 529 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 ASZ1Q8WWH4 475 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 TMEM159Q96B96 161 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 LRRC39Q96DD0 335 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 NRTNQ99748 197 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 RAB33BQ9H082 229 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 MVB12BQ9H7P6 319 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 INTS10Q9NVR2 710 aaKnown RBP12.66□□□□□ -0.38
DDX39A-218ENST00000592632 GALPQ9UBC7 116 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 GNPTGQ9UJJ9 305 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 FBXO5Q9UKT4 447 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 MRFAP1Q9Y605 127 aa12.66□□□□□ -0.38
DDX39A-218ENST00000592632 SNRNP200O75643 2136 aaKnown RBP12.65□□□□□ -0.38
DDX39A-218ENST00000592632 MN1Q10571 1320 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-218ENST00000592632 ANKRD12Q6UB98 2062 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 A8MU76 341 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 CDRT15L2A8MXV6 281 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 HGSO14964 777 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-218ENST00000592632 PFDN6O15212 129 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 CAPN5O15484 640 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-218ENST00000592632 HAUS5O94927 633 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 ESR1P03372 595 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 FGF3P11487 239 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-218ENST00000592632 PKMP14618 531 aaKnown RBP12.65□□□□□ -0.38
DDX39A-218ENST00000592632 ITIH1P19827 911 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 RBMS1P29558 406 aaKnown RBP12.65□□□□□ -0.38
DDX39A-218ENST00000592632 SLC1A2P43004 574 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 LEPRP48357 1165 aaKnown RBP12.65□□□□□ -0.38
DDX39A-218ENST00000592632 ERVPABLB-1P60509 514 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 PPP1CAP62136 330 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 HSPA14Q0VDF9 509 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 PRKG2Q13237 762 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 TUBB2AQ13885 445 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 KRT33BQ14525 404 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 FASTKD3Q14CZ7 662 aaKnown RBP12.65□□□□□ -0.38
DDX39A-218ENST00000592632 COL28A1Q2UY09 1125 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 TBC1D25Q3MII6 688 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 STEAP4Q687X5 459 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 ZNF549Q6P9A3 640 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 KCNMB4Q86W47 210 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 LMNTD2Q8IXW0 634 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 SLC22A15Q8IZD6 547 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 OR4E2Q8NGC2 313 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 CALML6Q8TD86 181 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 FGF11Q92914 225 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 C9orf72Q96LT7 481 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 ZNF578Q96N58 590 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-218ENST00000592632 TGM7Q96PF1 710 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 PANX3Q96QZ0 392 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 CMKLR1Q99788 373 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 LRRC1Q9BTT6 524 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 TUBB2BQ9BVA1 445 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 TSSK1BQ9BXA7 367 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 FBXO6Q9NRD1 293 aaPredicted RBP12.65□□□□□ -0.38
DDX39A-218ENST00000592632 LATS2Q9NRM7 1088 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 IARS2Q9NSE4 1012 aaKnown RBP12.65□□□□□ -0.38
DDX39A-218ENST00000592632 ZC3H7BQ9UGR2 993 aaKnown RBP12.65□□□□□ -0.38
DDX39A-218ENST00000592632 CHMP2BQ9UQN3 213 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 RAXQ9Y2V3 346 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 PCM1Q15154 2024 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 ITPR1Q14643 2758 aa12.65□□□□□ -0.38
DDX39A-218ENST00000592632 OR6C74A6NCV1 312 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 H3BMM5 538 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 NDC80O14777 642 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 KIF1CO43896 1103 aaKnown RBP12.64□□□□□ -0.39
DDX39A-218ENST00000592632 NIPSNAP2O75323 286 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 APOA4P06727 396 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 TPBGLP0DKB5 382 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 GABRB3P28472 473 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 CSTF2P33240 577 aaKnown RBP eCLIP12.64□□□□□ -0.39
DDX39A-218ENST00000592632 MLLT3P42568 568 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-218ENST00000592632 CAPZBP47756 277 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 MPP1Q00013 466 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 SLC7A5Q01650 507 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 ABRQ12979 859 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 PDIA2Q13087 525 aaKnown RBP12.64□□□□□ -0.39
DDX39A-218ENST00000592632 GBX1Q14549 363 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 SYTL3Q4VX76 610 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 TRMT10BQ6PF06 316 aaKnown RBP12.64□□□□□ -0.39
DDX39A-218ENST00000592632 CNSTQ6PJW8 725 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 CLEC14AQ86T13 490 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 ANKMY2Q8IV38 441 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 SPNS2Q8IVW8 549 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 TBC1D21Q8IYX1 336 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 MMGT1Q8N4V1 131 aa12.64□□□□□ -0.39
DDX39A-218ENST00000592632 C2CD4AQ8NCU7 369 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-218ENST00000592632 AGBL5Q8NDL9 886 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms