RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 ATG9AQ7Z3C6 839 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 LUZP1Q86V48 1076 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 ARHGAP12Q8IWW6 846 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 UNC45BQ8IWX7 931 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 TMCO5AQ8N6Q1 288 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 ZBTB8BQ8NAP8 495 aaPredicted RBP3.42□□□□□ -1.86
VMP1-212ENST00000591782 GDAP1Q8TB36 358 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 IFT81Q8WYA0 676 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 SEPT8Q92599 483 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 ARHGEF26Q96DR7 871 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 GRAMD2BQ96HH9 432 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 VPS39Q96JC1 886 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 FAM84BQ96KN1 310 aaPredicted RBP3.42□□□□□ -1.86
VMP1-212ENST00000591782 ACOX2Q99424 681 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 SELENOSQ9BQE4 189 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 DESI2Q9BSY9 194 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 ITPAQ9BY32 194 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 KRTAP9-8Q9BYQ0 159 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 MUC13Q9H3R2 512 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 DDX31Q9H8H2 851 aaKnown RBP3.42□□□□□ -1.86
VMP1-212ENST00000591782 SEBOXQ9HB31 216 aaPredicted RBP3.42□□□□□ -1.86
VMP1-212ENST00000591782 VCX3AQ9NNX9 186 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 ACSS1Q9NUB1 689 aaPredicted RBP3.42□□□□□ -1.86
VMP1-212ENST00000591782 ABCF3Q9NUQ8 709 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 SLC39A1Q9NY26 324 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 AATFQ9NY61 560 aaKnown RBP eCLIP3.42□□□□□ -1.86
VMP1-212ENST00000591782 ZNF224Q9NZL3 707 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 EHD2Q9NZN4 543 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.42□□□□□ -1.86
VMP1-212ENST00000591782 SIX4Q9UIU6 781 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 MOSPD1Q9UJG1 213 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 LAMP5Q9UJQ1 280 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 KCNS2Q9ULS6 477 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 CORO1CQ9ULV4 474 aaPredicted RBP3.42□□□□□ -1.86
VMP1-212ENST00000591782 TMCO1Q9UM00 188 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 LRP12Q9Y561 859 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 MAU2Q9Y6X3 613 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 MYO3BQ8WXR4 1341 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 SRCAPQ6ZRS2 3230 aa3.42□□□□□ -1.86
VMP1-212ENST00000591782 NESP48681 1621 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 SAA2-SAA4A0A096LPE2 208 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 ERICH2A1L162 156 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 C1orf226A1L170 272 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 CTAGE9A4FU28 777 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 PI4KAP2A4QPH2 592 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 LIPT2A6NK58 231 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 PSMD14O00487 310 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 WDR46O15213 610 aaKnown RBP3.41□□□□□ -1.86
VMP1-212ENST00000591782 POLR2DO15514 142 aaKnown RBP3.41□□□□□ -1.86
VMP1-212ENST00000591782 SLC7A4O43246 635 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 NOL3O60936 208 aaKnown RBP3.41□□□□□ -1.86
VMP1-212ENST00000591782 RTN2O75298 545 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 CRTAPO75718 401 aaPredicted RBP3.41□□□□□ -1.86
VMP1-212ENST00000591782 SLC25A12O75746 678 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 PALMO75781 387 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 TSPAN9O75954 239 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 ADCY5O95622 1261 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 APBB3O95704 486 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 DDX58O95786 925 aaKnown RBP3.41□□□□□ -1.86
VMP1-212ENST00000591782 SCGB1D1O95968 90 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 PENKP01210 267 aaPredicted RBP3.41□□□□□ -1.86
VMP1-212ENST00000591782 KRT14P02533 472 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 SLC4A1P02730 911 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 P4HA1P13674 534 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 CSF2RAP15509 400 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 IL32P24001 234 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 MAPK4P31152 587 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 LONP1P36776 959 aaKnown RBP3.41□□□□□ -1.86
VMP1-212ENST00000591782 CLCNKAP51800 687 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 CSNK2A1P68400 391 aaPredicted RBP3.41□□□□□ -1.86
VMP1-212ENST00000591782 NIPAL4Q0D2K0 466 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 CBX3Q13185 183 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 CYLC2Q14093 348 aaPredicted RBP3.41□□□□□ -1.86
VMP1-212ENST00000591782 NONOQ15233 471 aaKnown RBP eCLIP3.41□□□□□ -1.86
VMP1-212ENST00000591782 TSC22D1Q15714 1073 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 SLC10A5Q5PT55 438 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 CYP4A22Q5TCH4 519 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 C16orf54Q6UWD8 224 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 OLFM4Q6UX06 510 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 CCNI2Q6ZMN8 369 aaPredicted RBP3.41□□□□□ -1.86
VMP1-212ENST00000591782 BRINP3Q76B58 766 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 ADCK1Q86TW2 530 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 SLC9B2Q86UD5 537 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 VPS36Q86VN1 386 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 ZNF34Q8IZ26 560 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 BEST3Q8N1M1 668 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 PCDH20Q8N6Y1 951 aaKnown RBP3.41□□□□□ -1.86
VMP1-212ENST00000591782 CSNK2A3Q8NEV1 391 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 OR8K1Q8NGG5 319 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 OR8K3Q8NH51 312 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 RAPGEF5Q92565 580 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 KIFAP3Q92845 792 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 ZKSCAN4Q969J2 545 aaPredicted RBP3.41□□□□□ -1.86
VMP1-212ENST00000591782 NCLNQ969V3 563 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 SGK3Q96BR1 496 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 ORAI1Q96D31 301 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 TMEM19Q96HH6 336 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 IGSF21Q96ID5 467 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 ATP6V1G3Q96LB4 118 aa3.41□□□□□ -1.86
VMP1-212ENST00000591782 HARBI1Q96MB7 349 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms