RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 LRRD1A4D1F6 860 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 CLEC18AA5D8T8 446 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 APOL1O14791 398 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 MTSS1O43312 755 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 URI1O94763 535 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-226ENST00000591534 NDST3O95803 873 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 KLK3P07288 261 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-226ENST00000591534 MMP2P08253 660 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 PYGMP11217 842 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 ZNF28P17035 718 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 KDELR1P24390 212 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 RPL10P27635 214 aaKnown RBP9.23□□□□□ -0.93
BRCA1-226ENST00000591534 LEPRP48357 1165 aaKnown RBP9.23□□□□□ -0.93
BRCA1-226ENST00000591534 PGDP52209 483 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 RWDD2BP57060 319 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 HSD11B2P80365 405 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 TMEM115Q12893 351 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-226ENST00000591534 SLC10A2Q12908 348 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-226ENST00000591534 SEMA5AQ13591 1074 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 GPR18Q14330 331 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 MESDQ14696 234 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 PLCL1Q15111 1095 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 PCSK7Q16549 785 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 LDLRAP1Q5SW96 308 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 ATP1A1-AS1Q5TC04 95 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 FHL5Q5TD97 284 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 CLEC18BQ6UXF7 455 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 FAM92BQ6ZTR7 304 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 SYVN1Q86TM6 617 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 HPS6Q86YV9 775 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 CARFQ8N187 725 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 PQLC3Q8N755 202 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 TMEM102Q8N9M5 508 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-226ENST00000591534 CLEC18CQ8NCF0 446 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 GALNT11Q8NCW6 608 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 ZFPM2Q8WW38 1151 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 RAPGEF5Q92565 580 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 ZNF514Q96K75 400 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-226ENST00000591534 AGAP3Q96P47 875 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 FRMD8P1Q9BZ68 369 aaPredicted RBP9.23□□□□□ -0.93
BRCA1-226ENST00000591534 ACBD3Q9H3P7 528 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 ARFGAP3Q9NP61 516 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 OGFRQ9NZT2 677 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 HACD3Q9P035 362 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 SLC23A2Q9UGH3 650 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 TLK1Q9UKI8 766 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 SNX12Q9UMY4 172 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 EFR3BQ9Y2G0 817 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 SLC30A1Q9Y6M5 507 aa9.23□□□□□ -0.93
BRCA1-226ENST00000591534 A0A096LPE4 126 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 A0A1W2PPZ6 126 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 CTAGE15A4D2H0 777 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 OR52A4PA6NMU1 304 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 USP27XA6NNY8 438 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 CCDC188H7C350 402 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 AGFG2O95081 481 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 CTAGE8P0CG41 777 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 BPIP17213 487 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 F8A1P23610 371 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 PTPN4P29074 926 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 HMGCLP35914 325 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 NR2C2P49116 596 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 DRG2P55039 364 aaKnown RBP9.22□□□□□ -0.93
BRCA1-226ENST00000591534 ZBTB17Q13105 803 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 ITGA9Q13797 1035 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 UGT8Q16880 541 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 LONRF2Q1L5Z9 754 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 GLE1Q53GS7 698 aaKnown RBP9.22□□□□□ -0.93
BRCA1-226ENST00000591534 ZNF648Q5T619 568 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-226ENST00000591534 B4GALNT4Q76KP1 1039 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 CTAGE6Q86UF2 777 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 OOSP2Q86WS3 158 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 CTAGE4Q8IX94 777 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 RCOR2Q8IZ40 523 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 SLC35F6Q8N357 371 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 CNTD1Q8N815 330 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 LRRC57Q8N9N7 239 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 CT55Q8WUE5 264 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 RSC1A1Q92681 617 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 SLC41A2Q96JW4 573 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 PKNOX2Q96KN3 472 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 PSMG3-AS1Q96PY0 264 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 TRIB3Q96RU7 358 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 ACTL8Q9H568 366 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 FANCEQ9HB96 536 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 ACSS2Q9NR19 701 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 SEMA5BQ9P283 1151 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 TRIM10Q9UDY6 481 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 TTC7AQ9ULT0 858 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-226ENST00000591534 PKP3Q9Y446 797 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 PCDHGA9Q9Y5G4 932 aaKnown RBP9.22□□□□□ -0.93
BRCA1-226ENST00000591534 ALG6Q9Y672 507 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 FLNCQ14315 2725 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 PTPN13Q12923 2485 aa9.22□□□□□ -0.93
BRCA1-226ENST00000591534 BLACEA4D250 179 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 TLCD2A6NGC4 264 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 C3orf70A6NLC5 250 aaPredicted RBP9.21□□□□□ -0.94
BRCA1-226ENST00000591534 EFCAB8A8MWE9 144 aa9.21□□□□□ -0.94
BRCA1-226ENST00000591534 KIF1CO43896 1103 aaKnown RBP9.21□□□□□ -0.94
BRCA1-226ENST00000591534 MTX2O75431 263 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms