RNA–Protein interactions for RNA: ENST00000588907.2

SCAMP4-211, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-211ENST00000588907 C1orf61Q13536 156 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 CSHL1Q14406 222 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 ACAP2Q15057 778 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 SHBQ15464 509 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 CLEC14AQ86T13 490 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 SRRM1Q8IYB3 904 aaKnown RBP16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 FBXO15Q8NCQ5 510 aaPredicted RBP16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 PHC3Q8NDX5 983 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 CCL4L1Q8NHW4 92 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 RHEBL1Q8TAI7 183 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 ZDHHC1Q8WTX9 485 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 ZFPM2Q8WW38 1151 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 WWP1Q9H0M0 922 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 TFB2MQ9H5Q4 396 aaKnown RBP16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 MVB12BQ9H7P6 319 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 MED4Q9NPJ6 270 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 EVA1BQ9NVM1 165 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 POLG2Q9UHN1 485 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 NOVA2Q9UNW9 492 aaKnown RBP16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 PLEKHM1Q9Y4G2 1056 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 ST14Q9Y5Y6 855 aa16.58■□□□□ 0.24
SCAMP4-211ENST00000588907 A0A1W2PPM1 405 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 SYCE1LA8MT33 242 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 COPEO14579 308 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 YY2O15391 372 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 ZBTB14O43829 449 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 SDC3O75056 442 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 RBP1P09455 135 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 MTHFD1P11586 935 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 CYP2A7P20853 494 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 RPL10P27635 214 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 MAP4P27816 1152 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 ACADLP28330 430 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 PDHA2P29803 388 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 CRHR1P34998 444 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 SPEM2Q0P670 501 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 SEPT7Q16181 437 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 CCDC6Q16204 474 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 PRAMEF14Q5SWL7 426 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 C6orf132Q5T0Z8 1188 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 ZCCHC8Q6NZY4 707 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 IYDQ6PHW0 289 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 TMEM207Q6UWW9 146 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 XKR5Q6UX68 686 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 NAPRTQ6XQN6 538 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 SH2D5Q6ZV89 423 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 SLC9B2Q86UD5 537 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 VRK3Q8IV63 474 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 DCUN1D3Q8IWE4 304 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 TRIM48Q8IWZ4 208 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 TBC1D21Q8IYX1 336 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 CENPLQ8N0S6 344 aaPredicted RBP16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 LILRA3Q8N6C8 439 aaPredicted RBP16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 ANKRD49Q8WVL7 239 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 ASB11Q8WXH4 323 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 TFGQ92734 400 aaPredicted RBP16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 KIAA1191Q96A73 305 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 CXorf40BQ96DE9 158 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 APOPT1Q96IL0 206 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 ATP6V1G3Q96LB4 118 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 RMDN2Q96LZ7 410 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 C12orf66Q96MD2 445 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 TRIM54Q9BYV2 358 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 TRIT1Q9H3H1 467 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 PRDM8Q9NQV8 689 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 POT1Q9NUX5 634 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 GRID1Q9ULK0 1009 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 ASF1AQ9Y294 204 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 GPR179Q6PRD1 2367 aa16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 TDRD6O60522 2096 aaKnown RBP16.57■□□□□ 0.24
SCAMP4-211ENST00000588907 GFYI3L273 518 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 BTN3A1O00481 513 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 PSIP1O75475 530 aaKnown RBP16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 CD1DP15813 335 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 XRCC1P18887 633 aaPredicted RBP16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 RPIAP49247 311 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 AP1S2P56377 157 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 KRT33BQ14525 404 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 CCDC153Q494R4 210 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 PPM1JQ5JR12 505 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 TCEAL6Q6IPX3 200 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 OGFOD3Q6PK18 319 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 CYHR1Q6ZMK1 362 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 KANSL1Q7Z3B3 1105 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 PIWIL4Q7Z3Z4 852 aaKnown RBP16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 SLC25A45Q8N413 288 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 SFRP1Q8N474 314 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 RAB42Q8N4Z0 105 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 ARL10Q8N8L6 244 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 OR6C4Q8NGE1 309 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 OR4C6Q8NH72 309 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 OR5K2Q8NHB8 316 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 STAG3L4Q8TBR4 150 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 MAPK15Q8TD08 544 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 MCOLN3Q8TDD5 553 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 KCTD4Q8WVF5 259 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 TCEAL3Q969E4 200 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 SH3KBP1Q96B97 665 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 TLCD1Q96CP7 247 aa16.56■□□□□ 0.24
SCAMP4-211ENST00000588907 EDEM2Q9BV94 578 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms