RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 AVL9Q8NBF6 648 aa19.73■□□□□ 0.75
ATG4D-208ENST00000588667 RBBP8Q99708 897 aa19.73■□□□□ 0.75
ATG4D-208ENST00000588667 LRIT1Q9P2V4 623 aa19.73■□□□□ 0.75
ATG4D-208ENST00000588667 ACSL5Q9ULC5 683 aa19.73■□□□□ 0.75
ATG4D-208ENST00000588667 ITGA2BP08514 1039 aa19.72■□□□□ 0.75
ATG4D-208ENST00000588667 RPL10P27635 214 aaKnown RBP19.72■□□□□ 0.75
ATG4D-208ENST00000588667 MDH1P40925 334 aaKnown RBP19.72■□□□□ 0.75
ATG4D-208ENST00000588667 BMPR2Q13873 1038 aa19.72■□□□□ 0.75
ATG4D-208ENST00000588667 MROH9Q5TGP6 573 aa19.72■□□□□ 0.75
ATG4D-208ENST00000588667 TIFABQ6ZNK6 161 aa19.72■□□□□ 0.75
ATG4D-208ENST00000588667 KIAA0408Q6ZU52 694 aa19.72■□□□□ 0.75
ATG4D-208ENST00000588667 ZNF438Q7Z4V0 828 aa19.72■□□□□ 0.75
ATG4D-208ENST00000588667 RAB44Q7Z6P3 723 aaPredicted RBP19.72■□□□□ 0.75
ATG4D-208ENST00000588667 C4orf33Q8N1A6 199 aa19.72■□□□□ 0.75
ATG4D-208ENST00000588667 CCDC3Q9BQI4 270 aa19.72■□□□□ 0.75
ATG4D-208ENST00000588667 CAPS2Q9BXY5 557 aa19.72■□□□□ 0.75
ATG4D-208ENST00000588667 STN1Q9H668 368 aaKnown RBP19.72■□□□□ 0.75
ATG4D-208ENST00000588667 FAM8A1Q9UBU6 413 aa19.72■□□□□ 0.75
ATG4D-208ENST00000588667 VPS9D1Q9Y2B5 631 aa19.72■□□□□ 0.75
ATG4D-208ENST00000588667 RHPN2P1A8MT19 583 aa19.71■□□□□ 0.75
ATG4D-208ENST00000588667 PRPF4O43172 522 aaKnown RBP eCLIP19.71■□□□□ 0.75
ATG4D-208ENST00000588667 RPS3P23396 243 aaKnown RBP eCLIP19.71■□□□□ 0.75
ATG4D-208ENST00000588667 HALP42357 657 aa19.71■□□□□ 0.75
ATG4D-208ENST00000588667 LIMK2P53671 638 aa19.71■□□□□ 0.75
ATG4D-208ENST00000588667 SLC18A1P54219 525 aa19.71■□□□□ 0.75
ATG4D-208ENST00000588667 NR1D2Q14995 579 aa19.71■□□□□ 0.75
ATG4D-208ENST00000588667 ZNF658BQ4V348 819 aaPredicted RBP19.71■□□□□ 0.75
ATG4D-208ENST00000588667 XKR5Q6UX68 686 aa19.71■□□□□ 0.75
ATG4D-208ENST00000588667 SLC9B2Q86UD5 537 aa19.71■□□□□ 0.75
ATG4D-208ENST00000588667 LPGAT1Q92604 370 aa19.71■□□□□ 0.75
ATG4D-208ENST00000588667 TSSK1BQ9BXA7 367 aa19.71■□□□□ 0.75
ATG4D-208ENST00000588667 P2RY12Q9H244 342 aa19.71■□□□□ 0.75
ATG4D-208ENST00000588667 SARS2Q9NP81 518 aaKnown RBP19.71■□□□□ 0.75
ATG4D-208ENST00000588667 INTS10Q9NVR2 710 aaKnown RBP19.71■□□□□ 0.75
ATG4D-208ENST00000588667 NKIRAS1Q9NYS0 192 aa19.71■□□□□ 0.75
ATG4D-208ENST00000588667 SCHIP1Q9P0W5 487 aaPredicted RBP19.71■□□□□ 0.75
ATG4D-208ENST00000588667 GNPTGQ9UJJ9 305 aa19.71■□□□□ 0.75
ATG4D-208ENST00000588667 TRBV23OR9-2A0A075B6M9 112 aa19.7■□□□□ 0.74
ATG4D-208ENST00000588667 HMX2A2RU54 273 aa19.7■□□□□ 0.74
ATG4D-208ENST00000588667 CHN1P15882 459 aa19.7■□□□□ 0.74
ATG4D-208ENST00000588667 ADARP55265 1226 aaKnown RBP19.7■□□□□ 0.74
ATG4D-208ENST00000588667 HHEXQ03014 270 aa19.7■□□□□ 0.74
ATG4D-208ENST00000588667 FOXC1Q12948 553 aa19.7■□□□□ 0.74
ATG4D-208ENST00000588667 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.7■□□□□ 0.74
ATG4D-208ENST00000588667 CFAP206Q8IYR0 622 aa19.7■□□□□ 0.74
ATG4D-208ENST00000588667 C2CD4AQ8NCU7 369 aaPredicted RBP19.7■□□□□ 0.74
ATG4D-208ENST00000588667 WDR48Q8TAF3 677 aa19.7■□□□□ 0.74
ATG4D-208ENST00000588667 ABCG4Q9H172 646 aa19.7■□□□□ 0.74
ATG4D-208ENST00000588667 COG4Q9H9E3 785 aa19.7■□□□□ 0.74
ATG4D-208ENST00000588667 CPNE7Q9UBL6 633 aa19.7■□□□□ 0.74
ATG4D-208ENST00000588667 FBXO5Q9UKT4 447 aa19.7■□□□□ 0.74
ATG4D-208ENST00000588667 WDR37Q9Y2I8 494 aa19.7■□□□□ 0.74
ATG4D-208ENST00000588667 UBA6A0AVT1 1052 aaPredicted RBP19.69■□□□□ 0.74
ATG4D-208ENST00000588667 PPM1DO15297 605 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 XRCC1P18887 633 aaPredicted RBP19.69■□□□□ 0.74
ATG4D-208ENST00000588667 SLC1A2P43004 574 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 GPR3P46089 330 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 UBE2IP63279 158 aaKnown RBP19.69■□□□□ 0.74
ATG4D-208ENST00000588667 INSM1Q01101 510 aaPredicted RBP19.69■□□□□ 0.74
ATG4D-208ENST00000588667 ILF2Q12905 390 aaKnown RBP19.69■□□□□ 0.74
ATG4D-208ENST00000588667 SPRED1Q7Z699 444 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 DENND6AQ8IWF6 608 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 CHCHD4Q8N4Q1 142 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 LILRA3Q8N6C8 439 aaPredicted RBP19.69■□□□□ 0.74
ATG4D-208ENST00000588667 MDM1Q8TC05 714 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 ACMSDQ8TDX5 336 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 ELMO1Q92556 727 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 RHOJQ9H4E5 214 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 POT1Q9NUX5 634 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 INTS9Q9NV88 658 aaKnown RBP19.69■□□□□ 0.74
ATG4D-208ENST00000588667 PSMD13Q9UNM6 376 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 PCDHB1Q9Y5F3 818 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 COL27A1Q8IZC6 1860 aaPredicted RBP19.69■□□□□ 0.74
ATG4D-208ENST00000588667 CEP295Q9C0D2 2601 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 GOLGA8RI6L899 631 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 LIN7AO14910 233 aaPredicted RBP19.69■□□□□ 0.74
ATG4D-208ENST00000588667 TYROBPO43914 113 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 SPAG7O75391 227 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 RFPL1O75677 317 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 SLC35G4P0C7Q5 338 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 PYGBP11216 843 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 GUCY1A3Q02108 690 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 SLC18A2Q05940 514 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 GABPB1Q06547 395 aaPredicted RBP19.69■□□□□ 0.74
ATG4D-208ENST00000588667 RPA4Q13156 261 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 CTBP1Q13363 440 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 CLCA4Q14CN2 919 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 PTRHD1Q6GMV3 140 aaKnown RBP19.69■□□□□ 0.74
ATG4D-208ENST00000588667 GALNT7Q86SF2 657 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 TRIM48Q8IWZ4 208 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 GALNT15Q8N3T1 639 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 BANPQ8N9N5 519 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 SH3KBP1Q96B97 665 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 VPS39Q96JC1 886 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 PANX3Q96QZ0 392 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 MCMBPQ9BTE3 642 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 WWP1Q9H0M0 922 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 PSD3Q9NYI0 1048 aa19.69■□□□□ 0.74
ATG4D-208ENST00000588667 ZNF624Q9P2J8 865 aaPredicted RBP19.69■□□□□ 0.74
ATG4D-208ENST00000588667 MED19A0JLT2 244 aaPredicted RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms