RNA–Protein interactions for RNA: ENST00000588472.6

SDF2-207, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 681 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-207ENST00000588472 EIF2B3Q9NR50 452 aaKnown RBP8.62□□□□□ -1.03
SDF2-207ENST00000588472 FBXO8Q9NRD0 319 aa8.62□□□□□ -1.03
SDF2-207ENST00000588472 MARCH4Q9P2E8 410 aaPredicted RBP8.62□□□□□ -1.03
SDF2-207ENST00000588472 TSR3Q9UJK0 312 aaKnown RBP8.62□□□□□ -1.03
SDF2-207ENST00000588472 ACSL6Q9UKU0 697 aa8.62□□□□□ -1.03
SDF2-207ENST00000588472 PCDHGA3Q9Y5H0 932 aa8.62□□□□□ -1.03
SDF2-207ENST00000588472 GOLGA6L10A0A0M3HER8 536 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 B8ZZF3 427 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 NDUFS3O75489 264 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 VAPBO95292 243 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 ANKRD34CP0C6C1 535 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 LIFP15018 202 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 FOLR1P15328 257 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 ZNF28P17035 718 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 CDH3P22223 829 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 PSMA3P25788 255 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 NDUFS1P28331 727 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 PPARGP37231 505 aaPredicted RBP8.61□□□□□ -1.03
SDF2-207ENST00000588472 GNG11P61952 73 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 HSPA14Q0VDF9 509 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 ABRQ12979 859 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 LY6DQ14210 128 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 PPP1R7Q15435 360 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 LRRC8BQ6P9F7 803 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 PCSK4Q6UW60 755 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 PACS1Q6VY07 963 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 TIPARPQ7Z3E1 657 aaKnown RBP8.61□□□□□ -1.03
SDF2-207ENST00000588472 PRSS42Q7Z5A4 293 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 NLGN4XQ8N0W4 816 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 MPP5Q8N3R9 675 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 ACVR1CQ8NER5 493 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 NLGN4YQ8NFZ3 816 aaPredicted RBP8.61□□□□□ -1.03
SDF2-207ENST00000588472 OR52E1Q8NGJ3 308 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 OR5AR1Q8NGP9 310 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 KLHL6Q8WZ60 621 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 FAM136AQ96C01 138 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 MFSD3Q96ES6 412 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 TEFMQ96QE5 360 aaKnown RBP8.61□□□□□ -1.03
SDF2-207ENST00000588472 TRIM56Q9BRZ2 755 aaKnown RBP8.61□□□□□ -1.03
SDF2-207ENST00000588472 KLHL25Q9H0H3 589 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 SOHLH2Q9NX45 425 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 SIDT1Q9NXL6 827 aaKnown RBP8.61□□□□□ -1.03
SDF2-207ENST00000588472 IL1RAPL1Q9NZN1 696 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 SAMD15Q9P1V8 674 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 EPHA6Q9UF33 1036 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 CIDEBQ9UHD4 219 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 LNPEPQ9UIQ6 1025 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 PLAGL1Q9UM63 463 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 SNX12Q9UMY4 172 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 ASF1AQ9Y294 204 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 PCDHGA4Q9Y5G9 962 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 BOD1L1Q8NFC6 3051 aa8.61□□□□□ -1.03
SDF2-207ENST00000588472 LOC101059948A0A1B0GTJ6 334 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 SLC9B1P1A6NJY1 282 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 F8W8V4 182 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 AP3B1O00203 1094 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 QSOX1O00391 747 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 BTN3A3O00478 584 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 BTN3A1O00481 513 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 LIN7AO14910 233 aaPredicted RBP8.6□□□□□ -1.03
SDF2-207ENST00000588472 TOX3O15405 576 aaPredicted RBP8.6□□□□□ -1.03
SDF2-207ENST00000588472 PHF2O75151 1096 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 KATNA1O75449 491 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 KIAA0754O94854 1291 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 NTRK1P04629 796 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 F7P08709 466 aaPredicted RBP8.6□□□□□ -1.03
SDF2-207ENST00000588472 PRKAR1AP10644 381 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 NELFEP18615 380 aaKnown RBP8.6□□□□□ -1.03
SDF2-207ENST00000588472 TPSB2P20231 275 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 FMO4P31512 558 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 CCR7P32248 378 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 CD151P48509 253 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 TTPAP49638 278 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 KPNA2P52292 529 aaKnown RBP8.6□□□□□ -1.03
SDF2-207ENST00000588472 EIF3BP55884 814 aaKnown RBP8.6□□□□□ -1.03
SDF2-207ENST00000588472 CDK16Q00536 496 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 ACVR1Q04771 509 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 RPA4Q13156 261 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 TUBB3Q13509 450 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 KCNJ11Q14654 390 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 TPSAB1Q15661 275 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 GPR19Q15760 415 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 ZNF658BQ4V348 819 aaPredicted RBP8.6□□□□□ -1.03
SDF2-207ENST00000588472 AARS2Q5JTZ9 985 aaKnown RBP8.6□□□□□ -1.03
SDF2-207ENST00000588472 SDCCAG8Q86SQ7 713 aaPredicted RBP8.6□□□□□ -1.03
SDF2-207ENST00000588472 CAND1Q86VP6 1230 aaKnown RBP8.6□□□□□ -1.03
SDF2-207ENST00000588472 HOOK3Q86VS8 718 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 AMIGO1Q86WK6 493 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 C2orf73Q8N5S3 287 aaPredicted RBP8.6□□□□□ -1.03
SDF2-207ENST00000588472 GALNT6Q8NCL4 622 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 GSDMBQ8TAX9 411 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 LKAAEAR1Q8TD35 194 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 ACTRT1Q8TDG2 376 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 SKA2Q8WVK7 121 aaPredicted RBP8.6□□□□□ -1.03
SDF2-207ENST00000588472 ZFPM2Q8WW38 1151 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 UBXN4Q92575 508 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 EXTL1Q92935 676 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 KIAA1143Q96AT1 154 aaPredicted RBP8.6□□□□□ -1.03
SDF2-207ENST00000588472 STAMBPL1Q96FJ0 436 aa8.6□□□□□ -1.03
SDF2-207ENST00000588472 ARHGAP9Q9BRR9 750 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms