RNA–Protein interactions for RNA: ENST00000586833.5

TPM4-205, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-205ENST00000586833 C3orf38Q5JPI3 329 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 HP1BP3Q5SSJ5 553 aaPredicted RBP13.75□□□□□ -0.21
TPM4-205ENST00000586833 CCDC25Q86WR0 208 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 SLITRK4Q8IW52 837 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 DENND6AQ8IWF6 608 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 CNTN4Q8IWV2 1026 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 CARFQ8N187 725 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 KRT222Q8N1A0 295 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 AGGF1Q8N302 714 aaeCLIP13.75□□□□□ -0.21
TPM4-205ENST00000586833 LILRA3Q8N6C8 439 aaPredicted RBP13.75□□□□□ -0.21
TPM4-205ENST00000586833 PHC3Q8NDX5 983 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 SPDYE1Q8NFV5 336 aaPredicted RBP13.75□□□□□ -0.21
TPM4-205ENST00000586833 GATA6Q92908 595 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 CCDC74BQ96LY2 380 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 ZNF578Q96N58 590 aaPredicted RBP13.75□□□□□ -0.21
TPM4-205ENST00000586833 TRIM56Q9BRZ2 755 aaKnown RBP13.75□□□□□ -0.21
TPM4-205ENST00000586833 RAB11FIP5Q9BXF6 653 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 RAB33BQ9H082 229 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 TFB2MQ9H5Q4 396 aaKnown RBP13.75□□□□□ -0.21
TPM4-205ENST00000586833 TAS2R13Q9NYV9 303 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 GRHL1Q9NZI5 618 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 IL1RAPL1Q9NZN1 696 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 DKK4Q9UBT3 224 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 EPHA6Q9UF33 1036 aa13.75□□□□□ -0.21
TPM4-205ENST00000586833 IGHV5-10-1A0A0J9YXX1 117 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 PABPN1LA6NDY0 278 aaKnown RBP13.74□□□□□ -0.21
TPM4-205ENST00000586833 OR5K3A6NET4 321 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 IQCF5A8MTL0 148 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 CAPN5O15484 640 aaPredicted RBP13.74□□□□□ -0.21
TPM4-205ENST00000586833 RASSF9O75901 435 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 SLCO2B1O94956 709 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 CBSLP0DN79 551 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 ENO3P13929 434 aaPredicted RBP13.74□□□□□ -0.21
TPM4-205ENST00000586833 STX2P32856 288 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 CBSP35520 551 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 RGS4P49798 205 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 SLC7A5Q01650 507 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 CTSL3PQ5NE16 218 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 SNAP47Q5SQN1 464 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 IRGCQ6NXR0 463 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 DUS1LQ6P1R4 473 aaKnown RBP13.74□□□□□ -0.21
TPM4-205ENST00000586833 FOXR1Q6PIV2 292 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 IGF2-ASQ6U949 168 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 SLC26A11Q86WA9 606 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 DCUN1D3Q8IWE4 304 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 OR5K2Q8NHB8 316 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 FBXO25Q8TCJ0 367 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 UBXN4Q92575 508 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 INPP5DQ92835 1189 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 PWWP2AQ96N64 755 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 BIRC8Q96P09 236 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 TGM7Q96PF1 710 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 HGH1Q9BTY7 390 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 SEMA6CQ9H3T2 930 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 LATS2Q9NRM7 1088 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 HRASLS2Q9NWW9 162 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 PDP2Q9P2J9 529 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 TRMT6Q9UJA5 497 aaKnown RBP13.74□□□□□ -0.21
TPM4-205ENST00000586833 SATB2Q9UPW6 733 aa13.74□□□□□ -0.21
TPM4-205ENST00000586833 TDRKHQ9Y2W6 561 aaKnown RBP13.74□□□□□ -0.21
TPM4-205ENST00000586833 CNOT1A5YKK6 2376 aaKnown RBP13.73□□□□□ -0.21
TPM4-205ENST00000586833 MN1Q10571 1320 aaPredicted RBP13.73□□□□□ -0.21
TPM4-205ENST00000586833 TP53BP1Q12888 1972 aaPredicted RBP13.73□□□□□ -0.21
TPM4-205ENST00000586833 LRP4O75096 1905 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 EIF3FO00303 357 aaPredicted RBP13.73□□□□□ -0.21
TPM4-205ENST00000586833 NIPSNAP2O75323 286 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 DXOO77932 396 aaKnown RBP13.73□□□□□ -0.21
TPM4-205ENST00000586833 MPOP05164 745 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 ITGA2BP08514 1039 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 ANKRD34CP0C6C1 535 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 ACADLP28330 430 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 CSF2RBP32927 897 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 PHBP35232 272 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 PDX1P52945 283 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 RAB15P59190 212 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 ERVPABLB-1P60509 514 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 MPP1Q00013 466 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 CYP4F3Q08477 520 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 CUL1Q13616 776 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 TEDDM1Q5T9Z0 273 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 MICALCLQ6ZW33 695 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 NEK10Q6ZWH5 1172 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 CYS1Q717R9 158 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 B3GNT8Q7Z7M8 397 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 AMIGO1Q86WK6 493 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 MARCH9Q86YJ5 346 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 IGDCC3Q8IVU1 814 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 IFT20Q8IY31 132 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 OR52E1Q8NGJ3 308 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 CFAP61Q8NHU2 1237 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 LKAAEAR1Q8TD35 194 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 ZCCHC14Q8WYQ9 949 aaKnown RBP13.73□□□□□ -0.21
TPM4-205ENST00000586833 SEC14L1Q92503 715 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 RAD51AP1Q96B01 352 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 C9orf72Q96LT7 481 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 AARSD1Q9BTE6 412 aaKnown RBP13.73□□□□□ -0.21
TPM4-205ENST00000586833 B3GNT4Q9C0J1 378 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 KLHL3Q9UH77 587 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 SLC39A10Q9ULF5 831 aa13.73□□□□□ -0.21
TPM4-205ENST00000586833 PCDHB11Q9Y5F2 797 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms