RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 ATP1A2P50993 1020 aa20.09■□□□□ 0.81
CIRBP-209ENST00000586555 SRSF6Q13247 344 aaKnown RBP20.09■□□□□ 0.81
CIRBP-209ENST00000586555 ZNF658BQ4V348 819 aaPredicted RBP20.09■□□□□ 0.81
CIRBP-209ENST00000586555 DUS1LQ6P1R4 473 aaKnown RBP20.09■□□□□ 0.81
CIRBP-209ENST00000586555 MICALCLQ6ZW33 695 aa20.09■□□□□ 0.81
CIRBP-209ENST00000586555 PCGF5Q86SE9 256 aa20.09■□□□□ 0.81
CIRBP-209ENST00000586555 LRRC6Q86X45 466 aa20.09■□□□□ 0.81
CIRBP-209ENST00000586555 ZFAND4Q86XD8 727 aa20.09■□□□□ 0.81
CIRBP-209ENST00000586555 PPIL6Q8IXY8 311 aa20.09■□□□□ 0.81
CIRBP-209ENST00000586555 UBXN4Q92575 508 aa20.09■□□□□ 0.81
CIRBP-209ENST00000586555 TFGQ92734 400 aaPredicted RBP20.09■□□□□ 0.81
CIRBP-209ENST00000586555 MED8Q96G25 268 aa20.09■□□□□ 0.81
CIRBP-209ENST00000586555 CARD6Q9BX69 1037 aa20.09■□□□□ 0.81
CIRBP-209ENST00000586555 ZNF768Q9H5H4 540 aaKnown RBP20.09■□□□□ 0.81
CIRBP-209ENST00000586555 PYCARDQ9ULZ3 195 aa20.09■□□□□ 0.81
CIRBP-209ENST00000586555 NEU2Q9Y3R4 380 aa20.09■□□□□ 0.81
CIRBP-209ENST00000586555 SPTA1P02549 2419 aa20.09■□□□□ 0.81
CIRBP-209ENST00000586555 TLN1Q9Y490 2541 aaKnown RBP20.09■□□□□ 0.81
CIRBP-209ENST00000586555 UBA6A0AVT1 1052 aaPredicted RBP20.08■□□□□ 0.81
CIRBP-209ENST00000586555 OR5K3A6NET4 321 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 MATN2O00339 956 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 PRMT5O14744 637 aaPredicted RBP20.08■□□□□ 0.81
CIRBP-209ENST00000586555 KDM1AO60341 852 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 PDHA2P29803 388 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 PREPP48147 710 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 ARL4DP49703 201 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 SEPHS1P49903 392 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 BOP1Q14137 746 aaKnown RBP20.08■□□□□ 0.81
CIRBP-209ENST00000586555 BRD3Q15059 726 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 DNTTIP2Q5QJE6 756 aaKnown RBP20.08■□□□□ 0.81
CIRBP-209ENST00000586555 ANKS6Q68DC2 871 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 PTRHD1Q6GMV3 140 aaKnown RBP20.08■□□□□ 0.81
CIRBP-209ENST00000586555 XKR5Q6UX68 686 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 FAM92BQ6ZTR7 304 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 BMPERQ8N8U9 685 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 LCN9Q8WX39 176 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 JPH3Q8WXH2 748 aaPredicted RBP20.08■□□□□ 0.81
CIRBP-209ENST00000586555 MFSD3Q96ES6 412 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 PANX3Q96QZ0 392 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 SRMSQ9H3Y6 488 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 RNF14Q9UBS8 474 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 B3GALT1Q9Y5Z6 326 aa20.08■□□□□ 0.81
CIRBP-209ENST00000586555 SETXQ7Z333 2677 aaKnown RBP20.07■□□□□ 0.8
CIRBP-209ENST00000586555 OR6C74A6NCV1 312 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 KPNA5O15131 536 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 AVILO75366 819 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 APOA4P06727 396 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 FOXM1Q08050 763 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 SEMA3AQ14563 771 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 TMED2Q15363 201 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 LINC00303Q3SY05 128 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 RNF187Q5TA31 235 aaPredicted RBP20.07■□□□□ 0.8
CIRBP-209ENST00000586555 ANKRD22Q5VYY1 191 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 CAND1Q86VP6 1230 aaKnown RBP20.07■□□□□ 0.8
CIRBP-209ENST00000586555 KMT5CQ86Y97 462 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 CARFQ8N187 725 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 OR4E2Q8NGC2 313 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 GSDMBQ8TAX9 411 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 ASZ1Q8WWH4 475 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 KLHL6Q8WZ60 621 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 SLCO2A1Q92959 643 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 CAPZA3Q96KX2 299 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 TCF12Q99081 682 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 DDX47Q9H0S4 455 aaKnown RBP20.07■□□□□ 0.8
CIRBP-209ENST00000586555 TFB2MQ9H5Q4 396 aaKnown RBP20.07■□□□□ 0.8
CIRBP-209ENST00000586555 ASIC3Q9UHC3 531 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 PCYOX1Q9UHG3 505 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 POLG2Q9UHN1 485 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 GNPTGQ9UJJ9 305 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 ASF1AQ9Y294 204 aa20.07■□□□□ 0.8
CIRBP-209ENST00000586555 FAM237BA0A1B0GVD1 139 aa20.06■□□□□ 0.8
CIRBP-209ENST00000586555 SLC5A10A0PJK1 596 aa20.06■□□□□ 0.8
CIRBP-209ENST00000586555 TLCD2A6NGC4 264 aa20.06■□□□□ 0.8
CIRBP-209ENST00000586555 B8ZZF3 427 aa20.06■□□□□ 0.8
CIRBP-209ENST00000586555 GOLGA8MH3BSY2 632 aa20.06■□□□□ 0.8
CIRBP-209ENST00000586555 TMEM63AO94886 807 aa20.06■□□□□ 0.8
CIRBP-209ENST00000586555 IL11RAQ14626 422 aa20.06■□□□□ 0.8
CIRBP-209ENST00000586555 KCTD19Q17RG1 926 aaPredicted RBP20.06■□□□□ 0.8
CIRBP-209ENST00000586555 MANEAQ5SRI9 462 aa20.06■□□□□ 0.8
CIRBP-209ENST00000586555 KIAA0930Q6ICG6 404 aaPredicted RBP20.06■□□□□ 0.8
CIRBP-209ENST00000586555 CES3Q6UWW8 571 aa20.06■□□□□ 0.8
CIRBP-209ENST00000586555 SYDE1Q6ZW31 735 aaPredicted RBP20.06■□□□□ 0.8
CIRBP-209ENST00000586555 LDB1Q86U70 411 aaPredicted RBP20.06■□□□□ 0.8
CIRBP-209ENST00000586555 NAT8LQ8N9F0 302 aa20.06■□□□□ 0.8
CIRBP-209ENST00000586555 PHC3Q8NDX5 983 aa20.06■□□□□ 0.8
CIRBP-209ENST00000586555 SERPINB12Q96P63 405 aa20.06■□□□□ 0.8
CIRBP-209ENST00000586555 TRIT1Q9H3H1 467 aaKnown RBP20.06■□□□□ 0.8
CIRBP-209ENST00000586555 MARCH4Q9P2E8 410 aaPredicted RBP20.06■□□□□ 0.8
CIRBP-209ENST00000586555 VPS9D1Q9Y2B5 631 aa20.06■□□□□ 0.8
CIRBP-209ENST00000586555 CCDC188H7C350 402 aa20.05■□□□□ 0.8
CIRBP-209ENST00000586555 MAP3K7O43318 606 aa20.05■□□□□ 0.8
CIRBP-209ENST00000586555 KIF1CO43896 1103 aaKnown RBP20.05■□□□□ 0.8
CIRBP-209ENST00000586555 NELFEP18615 380 aaKnown RBP20.05■□□□□ 0.8
CIRBP-209ENST00000586555 RPS3P23396 243 aaKnown RBP eCLIP20.05■□□□□ 0.8
CIRBP-209ENST00000586555 PTK6Q13882 451 aa20.05■□□□□ 0.8
CIRBP-209ENST00000586555 DHX34Q14147 1143 aaKnown RBP20.05■□□□□ 0.8
CIRBP-209ENST00000586555 CREG2Q8IUH2 290 aa20.05■□□□□ 0.8
CIRBP-209ENST00000586555 TBC1D21Q8IYX1 336 aa20.05■□□□□ 0.8
CIRBP-209ENST00000586555 EXD3Q8N9H8 876 aa20.05■□□□□ 0.8
CIRBP-209ENST00000586555 ZSCAN1Q8NBB4 408 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms