RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 OTOAQ7RTW8 1153 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 KANSL1Q7Z3B3 1105 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 RABEPKQ7Z6M1 372 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 RAB44Q7Z6P3 723 aaPredicted RBP12.4□□□□□ -0.42
VMP1-202ENST00000585847 LDB1Q86U70 411 aaPredicted RBP12.4□□□□□ -0.42
VMP1-202ENST00000585847 DCP2Q8IU60 420 aaKnown RBP12.4□□□□□ -0.42
VMP1-202ENST00000585847 MYO1HQ8N1T3 1032 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 FSTL5Q8N475 847 aaPredicted RBP12.4□□□□□ -0.42
VMP1-202ENST00000585847 ZBTB2Q8N680 514 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 GDAP1Q8TB36 358 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 PPP4R1Q8TF05 950 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 KCTD4Q8WVF5 259 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 ASZ1Q8WWH4 475 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 ZNF75CPQ92670 426 aaPredicted RBP12.4□□□□□ -0.42
VMP1-202ENST00000585847 GLMNQ92990 594 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 TSACCQ96A04 125 aaPredicted RBP12.4□□□□□ -0.42
VMP1-202ENST00000585847 PDXPQ96GD0 296 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 LINC00615Q96LM1 132 aaPredicted RBP12.4□□□□□ -0.42
VMP1-202ENST00000585847 WDR92Q96MX6 357 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 GPR78Q96P69 363 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 BOCQ9BWV1 1114 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 STN1Q9H668 368 aaKnown RBP12.4□□□□□ -0.42
VMP1-202ENST00000585847 RMI1Q9H9A7 625 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 ERVMER34-1Q9H9K5 563 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 TRIM39Q9HCM9 518 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 IGSF5Q9NSI5 407 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 MRGBPQ9NV56 204 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 OXSMQ9NWU1 459 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 XPR1Q9UBH6 696 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 EMCNQ9ULC0 261 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 MED16Q9Y2X0 877 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 ST14Q9Y5Y6 855 aa12.4□□□□□ -0.42
VMP1-202ENST00000585847 DNMT3AQ9Y6K1 912 aaPredicted RBP12.4□□□□□ -0.42
VMP1-202ENST00000585847 ARHGEF17Q96PE2 2063 aaPredicted RBP12.4□□□□□ -0.42
VMP1-202ENST00000585847 C17orf113A0A1B0GUU1 675 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 PABPN1LA6NDY0 278 aaKnown RBP12.39□□□□□ -0.43
VMP1-202ENST00000585847 TARM1B6A8C7 271 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 SLCO1B7G3V0H7 640 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 CACNB4O00305 520 aaPredicted RBP12.39□□□□□ -0.43
VMP1-202ENST00000585847 CDX4O14627 284 aaPredicted RBP12.39□□□□□ -0.43
VMP1-202ENST00000585847 KHNYNO15037 678 aaKnown RBP12.39□□□□□ -0.43
VMP1-202ENST00000585847 SLC16A5O15375 505 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 NUAK1O60285 661 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 SLC25A14O95258 325 aaPredicted RBP12.39□□□□□ -0.43
VMP1-202ENST00000585847 CSF2P04141 144 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 CD1DP15813 335 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 KELP23276 732 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 RXRGP48443 463 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 PRLHRP49683 370 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 CTSCP53634 463 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 C21orf59P57076 290 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 CSHL1Q14406 222 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 DOK6Q6PKX4 331 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 XKR5Q6UX68 686 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 ZNF547Q8IVP9 402 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 AFAP1L2Q8N4X5 818 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 RASGEF1AQ8N9B8 481 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 PHC3Q8NDX5 983 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 OR56A4Q8NGH8 313 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 BCAS4Q8TDM0 211 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 SCYL1Q96KG9 808 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 GPR21Q99679 349 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 PITPNM3Q9BZ71 974 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 TMEM216Q9P0N5 145 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 RUVBL2Q9Y230 463 aaKnown RBP12.39□□□□□ -0.43
VMP1-202ENST00000585847 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.39□□□□□ -0.43
VMP1-202ENST00000585847 PLEKHM1Q9Y4G2 1056 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 TNPO3Q9Y5L0 923 aaKnown RBP12.39□□□□□ -0.43
VMP1-202ENST00000585847 PRSS21Q9Y6M0 314 aa12.39□□□□□ -0.43
VMP1-202ENST00000585847 CHD6Q8TD26 2715 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 A0A1B0GTQ1 180 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 PRSS38A1L453 326 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 TCP11X1B4DZS4 312 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 STX16-NPEPL1H3BU86 382 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 STX16O14662 325 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 TNFRSF10CO14798 259 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 LIN7AO14910 233 aaPredicted RBP12.38□□□□□ -0.43
VMP1-202ENST00000585847 CHUKO15111 745 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 SCAMP1O15126 338 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 OR1I1O60431 355 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 NPHS1O60500 1241 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 EDF1O60869 148 aaKnown RBP12.38□□□□□ -0.43
VMP1-202ENST00000585847 SNNO75324 88 aaPredicted RBP12.38□□□□□ -0.43
VMP1-202ENST00000585847 IPO13O94829 963 aaKnown RBP12.38□□□□□ -0.43
VMP1-202ENST00000585847 C8GP07360 202 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 CELA2BP08218 269 aaPredicted RBP12.38□□□□□ -0.43
VMP1-202ENST00000585847 GIMD1P0DJR0 217 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 MPC1LP0DKB6 136 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 NME1P15531 152 aaKnown RBP12.38□□□□□ -0.43
VMP1-202ENST00000585847 VCLP18206 1134 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 TFEBP19484 476 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 ABCG1P45844 678 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 THOP1P52888 689 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 SRP54P61011 504 aaKnown RBP12.38□□□□□ -0.43
VMP1-202ENST00000585847 TMEM115Q12893 351 aaPredicted RBP12.38□□□□□ -0.43
VMP1-202ENST00000585847 BNIP3Q12983 259 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 RPA4Q13156 261 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 STX3Q13277 289 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 PTK2BQ14289 1009 aa12.38□□□□□ -0.43
VMP1-202ENST00000585847 PCLAFQ15004 111 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms