RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 ATG13O75143 517 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 GPC4O75487 556 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 CDK14O94921 469 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 SLCO2B1O94956 709 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 ESRRBO95718 433 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 CHEK2O96017 543 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 ADRB1P08588 477 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 ANXA5P08758 320 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 HIST1H2AGP0C0S8 130 aaPredicted RBP10.19□□□□□ -0.78
LIG3-203ENST00000585370 THRAP10827 490 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 C6P13671 934 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 ITGB6P18564 788 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 NCF2P19878 526 aaPredicted RBP10.19□□□□□ -0.78
LIG3-203ENST00000585370 HIST1H2ADP20671 130 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 TEAD1P28347 426 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 CCR7P32248 378 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 P2RY2P41231 377 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 KIR2DL1P43626 348 aaPredicted RBP10.19□□□□□ -0.78
LIG3-203ENST00000585370 GPR1P46091 355 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 PSMD8P48556 350 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 AP1S2P56377 157 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 MRPS21P82921 87 aaKnown RBP10.19□□□□□ -0.78
LIG3-203ENST00000585370 CNTN1Q12860 1018 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 GTF2H3Q13889 308 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 CST6Q15828 149 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 LSM12Q3MHD2 195 aaKnown RBP10.19□□□□□ -0.78
LIG3-203ENST00000585370 FBXO43Q4G163 708 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 BCL7AQ4VC05 210 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 SLC9B1Q4ZJI4 515 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 SBSNQ6UWP8 590 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 KBTBD6Q86V97 674 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 TMPRSS6Q8IU80 811 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 LKAAEAR1Q8TD35 194 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 MCOLN3Q8TDD5 553 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 UBTD2Q8WUN7 234 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 GAB3Q8WWW8 586 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 EZH1Q92800 747 aaPredicted RBP10.19□□□□□ -0.78
LIG3-203ENST00000585370 SLC7A6OSQ96CW6 309 aaPredicted RBP10.19□□□□□ -0.78
LIG3-203ENST00000585370 HIST1H2AHQ96KK5 128 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 ZNF382Q96SR6 550 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 HIST1H2AJQ99878 128 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 GABRG3Q99928 467 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 H2AFJQ9BTM1 129 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 HGH1Q9BTY7 390 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 WRAP53Q9BUR4 548 aaKnown RBP10.19□□□□□ -0.78
LIG3-203ENST00000585370 SLC12A9Q9BXP2 914 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 NUF2Q9BZD4 464 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 C1orf21Q9H246 121 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 ARRDC1-AS1Q9H2J1 176 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 PARVBQ9HBI1 364 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 TRIM39Q9HCM9 518 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 MID1IP1Q9NPA3 183 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 RXFP3Q9NSD7 469 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 ARL8BQ9NVJ2 186 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 CACNA2D2Q9NY47 1150 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 PCTPQ9UKL6 214 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 PRDM4Q9UKN5 801 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 IKZF3Q9UKT9 509 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 HCN2Q9UL51 889 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 GPR34Q9UPC5 381 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 WDFY3Q8IZQ1 3526 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 KIAA1549LQ6ZVL6 1849 aa10.19□□□□□ -0.78
LIG3-203ENST00000585370 C17orf113A0A1B0GUU1 675 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 FADS2P1A8MWK0 482 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 GPR89AB7ZAQ6 455 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 GFYI3L273 518 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 SDHDO14521 159 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 LIN7AO14910 233 aaPredicted RBP10.18□□□□□ -0.78
LIG3-203ENST00000585370 GYG2O15488 501 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 SPINT1O43278 529 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 CRCPO75575 148 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 TM7SF2O76062 418 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 SIX3O95343 332 aaPredicted RBP10.18□□□□□ -0.78
LIG3-203ENST00000585370 CBX6O95503 412 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 GPR89BP0CG08 455 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 C7P10643 843 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 UROSP10746 265 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 GM2AP17900 193 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 CYP2A7P20853 494 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 GGT5P36269 586 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 CCR10P46092 362 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 PRLHRP49683 370 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 HNMTP50135 292 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 HK3P52790 923 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 SH3BP2P78314 561 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 CCDC6Q16204 474 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 PPP1R3AQ16821 1122 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 UGT3A2Q3SY77 523 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 POM121L1PQ3SYA9 428 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 DNAL1Q4LDG9 190 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 VWA5B1Q5TIE3 1220 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 ADAMTSL4Q6UY14 1074 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 CAMKK1Q8N5S9 505 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 MAPK15Q8TD08 544 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 TRPC4APQ8TEL6 797 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 ASB11Q8WXH4 323 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 LOXL4Q96JB6 756 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 MAGEB10Q96LZ2 347 aaPredicted RBP10.18□□□□□ -0.78
LIG3-203ENST00000585370 ACOX2Q99424 681 aa10.18□□□□□ -0.78
LIG3-203ENST00000585370 EGFL8Q99944 293 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms