RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 MEIS2O14770 477 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 NEMFO60524 1076 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ATP6V1G1O75348 118 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ERAL1O75616 437 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 MMP3P08254 477 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PRR35P0CG20 571 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 CTNNB1P35222 781 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC16A2P36021 539 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 GP5P40197 560 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PRKCIP41743 596 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 MTHFRP42898 656 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 TOB1P50616 345 aaPredicted RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PGGT1BP53609 377 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC12A2P55011 1212 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 RALGDSQ12967 914 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PLA2G7Q13093 441 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 CBX3Q13185 183 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 SHBQ15464 509 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF674Q2M3X9 581 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PRICKLE4Q2TBC4 344 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 C2orf76Q3KRA6 126 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 RAB41Q5JT25 222 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 SH2D4BQ5SQS7 431 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 IL27RAQ6UWB1 636 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF813Q6ZN06 617 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 MOB3CQ70IA8 216 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PPP1R32Q7Z5V6 425 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ARHGAP30Q7Z6I6 1101 aaPredicted RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 SERINC5Q86VE9 423 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 SCN4BQ8IWT1 228 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 TUSC5Q8IXB3 177 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 GALNT16Q8N428 558 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 METTL25Q8N6Q8 603 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ANKRD13CQ8N6S4 541 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PNPLA1Q8N8W4 532 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM116Q8NCL8 245 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 RASSF8Q8NHQ8 419 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PPP4R1Q8TF05 950 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 SDR42E1Q8WUS8 393 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 KCNE4Q8WWG9 221 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PSPC1Q8WXF1 523 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 CRYGNQ8WXF5 182 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PIGKQ92643 395 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PABPC5Q96DU9 382 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PRR11Q96HE9 360 aaPredicted RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PGAM5Q96HS1 289 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF560Q96MR9 790 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 TSG101Q99816 390 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 GPATCH1Q9BRR8 931 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 PIMREGQ9BSJ6 248 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF577Q9BSK1 485 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 HDHD5Q9BXW7 423 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 EDEM3Q9BZQ6 932 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 NDST4Q9H3R1 872 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ASB7Q9H672 318 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 SERTAD4Q9NUC0 356 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 DECR2Q9NUI1 292 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 ABCB8Q9NUT2 735 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM161AQ9NX61 479 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 SELENONQ9NZV5 590 aa1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 CPSF3Q9UKF6 684 aaKnown RBP1.92□□□□□ -2.1
SMCHD1-211ENST00000584897 A0A087WV48 116 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 KRT87PA6NCN2 255 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF233A6NK53 670 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 NDC80O14777 642 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 PPEF2O14830 753 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 PMPCBO75439 489 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 RBMXL2O75526 392 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TPPPO94811 219 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 HEXIM1O94992 359 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TRUB2O95900 331 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TPM3P06753 285 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 HOXB5P09067 269 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 LYL1P12980 280 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 PLA2G2AP14555 144 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ZNF182P17025 639 aaPredicted RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 RAD23BP54727 409 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TMPRSS3P57727 454 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 RPS6P62753 249 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 MRPS6P82932 125 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 DSC1Q08554 894 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 NIPAL4Q0D2K0 466 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ITGA7Q13683 1181 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 KCNB1Q14721 858 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ZRSR1Q15695 479 aaKnown RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 CALCRLQ16602 461 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TPD52L1Q16890 204 aaPredicted RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 C5orf22Q49AR2 442 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 IFI44LQ53G44 452 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 KRBOX4Q5JUW0 171 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 AADACL2Q6P093 401 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ACSM6Q6P461 480 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 C11orf57Q6ZUT1 292 aaPredicted RBP1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 DET1Q7L5Y6 550 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TBC1D10CQ8IV04 446 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 TMEM86AQ8N2M4 240 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 LRRC43Q8N309 656 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 ARHGAP18Q8N392 663 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 FAM47BQ8NA70 645 aa1.91□□□□□ -2.1
SMCHD1-211ENST00000584897 SLC44A5Q8NCS7 719 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms