RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 NFATC3Q12968 1075 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 BOP1Q14137 746 aaKnown RBP17.51■□□□□ 0.39
SRSF1-208ENST00000584773 TRIP13Q15645 432 aaPredicted RBP17.51■□□□□ 0.39
SRSF1-208ENST00000584773 PRAMEF17Q5VTA0 474 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 C16orf46Q6P387 395 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 DRICH1Q6PGQ1 229 aaPredicted RBP17.51■□□□□ 0.39
SRSF1-208ENST00000584773 PACS1Q6VY07 963 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 GSTA5Q7RTV2 222 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 ZNF605Q86T29 641 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 PRELID2Q8N945 189 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 OR5AR1Q8NGP9 310 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 ZFPM2Q8WW38 1151 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 STARD8Q92502 1023 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 TFGQ92734 400 aaPredicted RBP17.51■□□□□ 0.39
SRSF1-208ENST00000584773 KIAA1143Q96AT1 154 aaPredicted RBP17.51■□□□□ 0.39
SRSF1-208ENST00000584773 STAMBPL1Q96FJ0 436 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 RUFY1Q96T51 708 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 CD180Q99467 661 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 KLHL25Q9H0H3 589 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 SRMSQ9H3Y6 488 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 FGF21Q9NSA1 209 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 POMT2Q9UKY4 750 aa17.51■□□□□ 0.39
SRSF1-208ENST00000584773 TTC7AQ9ULT0 858 aaPredicted RBP17.51■□□□□ 0.39
SRSF1-208ENST00000584773 DRG1Q9Y295 367 aaKnown RBP17.51■□□□□ 0.39
SRSF1-208ENST00000584773 SLC9B1P1A6NJY1 282 aa17.5■□□□□ 0.39
SRSF1-208ENST00000584773 IQCF5A8MTL0 148 aa17.5■□□□□ 0.39
SRSF1-208ENST00000584773 NTRK1P04629 796 aa17.5■□□□□ 0.39
SRSF1-208ENST00000584773 PVRP15151 417 aa17.5■□□□□ 0.39
SRSF1-208ENST00000584773 ARL4DP49703 201 aa17.5■□□□□ 0.39
SRSF1-208ENST00000584773 VPS41P49754 854 aa17.5■□□□□ 0.39
SRSF1-208ENST00000584773 CDC20Q12834 499 aa17.5■□□□□ 0.39
SRSF1-208ENST00000584773 MAP7Q14244 749 aa17.5■□□□□ 0.39
SRSF1-208ENST00000584773 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.5■□□□□ 0.39
SRSF1-208ENST00000584773 D2HGDHQ8N465 521 aa17.5■□□□□ 0.39
SRSF1-208ENST00000584773 PPHLN1Q8NEY8 458 aaKnown RBP17.5■□□□□ 0.39
SRSF1-208ENST00000584773 OR4L1Q8NH43 312 aa17.5■□□□□ 0.39
SRSF1-208ENST00000584773 MS4A14Q96JA4 679 aa17.5■□□□□ 0.39
SRSF1-208ENST00000584773 TRIT1Q9H3H1 467 aaKnown RBP17.5■□□□□ 0.39
SRSF1-208ENST00000584773 PDE7BQ9NP56 450 aa17.5■□□□□ 0.39
SRSF1-208ENST00000584773 SOHLH2Q9NX45 425 aa17.5■□□□□ 0.39
SRSF1-208ENST00000584773 RARRES3Q9UL19 164 aa17.5■□□□□ 0.39
SRSF1-208ENST00000584773 PLAGL1Q9UM63 463 aa17.5■□□□□ 0.39
SRSF1-208ENST00000584773 ICKQ9UPZ9 632 aa17.5■□□□□ 0.39
SRSF1-208ENST00000584773 HELZ2Q9BYK8 2649 aaKnown RBP17.5■□□□□ 0.39
SRSF1-208ENST00000584773 SLC5A10A0PJK1 596 aa17.49■□□□□ 0.39
SRSF1-208ENST00000584773 BHMG1C9JSJ3 638 aaPredicted RBP17.49■□□□□ 0.39
SRSF1-208ENST00000584773 TERTO14746 1132 aaKnown RBP17.49■□□□□ 0.39
SRSF1-208ENST00000584773 SNRNP200O75643 2136 aaKnown RBP17.49■□□□□ 0.39
SRSF1-208ENST00000584773 ZIC2O95409 532 aaPredicted RBP17.49■□□□□ 0.39
SRSF1-208ENST00000584773 CDH3P22223 829 aa17.49■□□□□ 0.39
SRSF1-208ENST00000584773 NMBRP28336 390 aa17.49■□□□□ 0.39
SRSF1-208ENST00000584773 CD151P48509 253 aa17.49■□□□□ 0.39
SRSF1-208ENST00000584773 PRAMEP78395 509 aa17.49■□□□□ 0.39
SRSF1-208ENST00000584773 HSD11B2P80365 405 aa17.49■□□□□ 0.39
SRSF1-208ENST00000584773 PRKAA1Q13131 559 aa17.49■□□□□ 0.39
SRSF1-208ENST00000584773 RPA4Q13156 261 aa17.49■□□□□ 0.39
SRSF1-208ENST00000584773 TTC27Q6P3X3 843 aa17.49■□□□□ 0.39
SRSF1-208ENST00000584773 FAM199XQ6PEV8 388 aaPredicted RBP17.49■□□□□ 0.39
SRSF1-208ENST00000584773 CES3Q6UWW8 571 aa17.49■□□□□ 0.39
SRSF1-208ENST00000584773 VRK3Q8IV63 474 aa17.49■□□□□ 0.39
SRSF1-208ENST00000584773 CT55Q8WUE5 264 aa17.49■□□□□ 0.39
SRSF1-208ENST00000584773 UBE2Q2Q8WVN8 375 aa17.49■□□□□ 0.39
SRSF1-208ENST00000584773 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.49■□□□□ 0.39
SRSF1-208ENST00000584773 EIF2B3Q9NR50 452 aaKnown RBP17.49■□□□□ 0.39
SRSF1-208ENST00000584773 RIMKLBQ9ULI2 386 aa17.49■□□□□ 0.39
SRSF1-208ENST00000584773 GOLGA6L3A6NEY3 463 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 B8ZZF3 427 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 LIN7AO14910 233 aaPredicted RBP17.48■□□□□ 0.39
SRSF1-208ENST00000584773 KATNA1O75449 491 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 ZBTB11O95625 1053 aaPredicted RBP17.48■□□□□ 0.39
SRSF1-208ENST00000584773 FTH1P02794 183 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 FURINP09958 794 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 OR56A5P0C7T3 313 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 TPBGLP0DKB5 382 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 ST6GAL1P15907 406 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 MGAT1P26572 445 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 ACADLP28330 430 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 PRDX3P30048 256 aaKnown RBP17.48■□□□□ 0.39
SRSF1-208ENST00000584773 CCR7P32248 378 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 ACY1Q03154 408 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 DEFB109BQ30KR1 87 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 SYTL3Q4VX76 610 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 FASTKD1Q53R41 847 aaKnown RBP17.48■□□□□ 0.39
SRSF1-208ENST00000584773 PCID2Q5JVF3 399 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 BORAQ6PGQ7 559 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 TMEM135Q86UB9 458 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 TRIM73Q86UV7 250 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 AMIGO1Q86WK6 493 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 KMT5CQ86Y97 462 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 ADGRF3Q8IZF5 1079 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 KRT222Q8N1A0 295 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 LMNTD1Q8N9Z9 388 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 ZNF501Q96CX3 271 aaPredicted RBP17.48■□□□□ 0.39
SRSF1-208ENST00000584773 MVB12BQ9H7P6 319 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 SYBUQ9NX95 663 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 ASF1AQ9Y294 204 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 ZKSCAN5Q9Y2L8 839 aa17.48■□□□□ 0.39
SRSF1-208ENST00000584773 TDRKHQ9Y2W6 561 aaKnown RBP17.48■□□□□ 0.39
SRSF1-208ENST00000584773 TLN1Q9Y490 2541 aaKnown RBP17.48■□□□□ 0.39
SRSF1-208ENST00000584773 POLE2P56282 527 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms