RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 CHI3L2Q15782 390 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 TYSND1Q2T9J0 566 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 PERM1Q5SV97 790 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 HECTD2Q5U5R9 776 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 ZCCHC8Q6NZY4 707 aaKnown RBP10.01□□□□□ -0.81
SS18-210ENST00000578700 ERAP2Q6P179 960 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 CNSTQ6PJW8 725 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 CDHR3Q6ZTQ4 885 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 USP53Q70EK8 1073 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 ERN2Q76MJ5 926 aaKnown RBP10.01□□□□□ -0.81
SS18-210ENST00000578700 LYSMD3Q7Z3D4 306 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 PIGWQ7Z7B1 504 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 ABI3BPQ7Z7G0 1075 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 EXD3Q8N9H8 876 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 ZNF548Q8NEK5 533 aaPredicted RBP10.01□□□□□ -0.81
SS18-210ENST00000578700 OR2A12Q8NGT7 310 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 HCAR2Q8TDS4 363 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 SNRNP27Q8WVK2 155 aaKnown RBP10.01□□□□□ -0.81
SS18-210ENST00000578700 PRR11Q96HE9 360 aaPredicted RBP10.01□□□□□ -0.81
SS18-210ENST00000578700 NSMCE3Q96MG7 304 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 KLHL32Q96NJ5 620 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 LYSMD1Q96S90 227 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 CCNL2Q96S94 520 aaPredicted RBP10.01□□□□□ -0.81
SS18-210ENST00000578700 SLC17A9Q9BYT1 436 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 TRIM55Q9BYV6 548 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 SYTL2Q9HCH5 934 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 SIRPGQ9P1W8 387 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 IL36AQ9UHA7 158 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 FKBPLQ9UIM3 349 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 RUVBL2Q9Y230 463 aaKnown RBP10.01□□□□□ -0.81
SS18-210ENST00000578700 ARL2BPQ9Y2Y0 163 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 HS3ST3A1Q9Y663 406 aa10.01□□□□□ -0.81
SS18-210ENST00000578700 AHCTF1Q8WYP5 2266 aa10□□□□□ -0.81
SS18-210ENST00000578700 GLYATL1P3A0A0U1RQE8 302 aa10□□□□□ -0.81
SS18-210ENST00000578700 EME2A4GXA9 379 aaPredicted RBP10□□□□□ -0.81
SS18-210ENST00000578700 E5RI56 91 aa10□□□□□ -0.81
SS18-210ENST00000578700 AURKAO14965 403 aa10□□□□□ -0.81
SS18-210ENST00000578700 RAD51BO15315 384 aa10□□□□□ -0.81
SS18-210ENST00000578700 AQP9O43315 295 aa10□□□□□ -0.81
SS18-210ENST00000578700 SNX3O60493 162 aa10□□□□□ -0.81
SS18-210ENST00000578700 ZNF821O75541 412 aaPredicted RBP10□□□□□ -0.81
SS18-210ENST00000578700 KLHL2O95198 593 aa10□□□□□ -0.81
SS18-210ENST00000578700 PROCP04070 461 aa10□□□□□ -0.81
SS18-210ENST00000578700 CSF2P04141 144 aa10□□□□□ -0.81
SS18-210ENST00000578700 PRNPP04156 253 aa10□□□□□ -0.81
SS18-210ENST00000578700 RBP1P09455 135 aa10□□□□□ -0.81
SS18-210ENST00000578700 LTA4HP09960 611 aaKnown RBP10□□□□□ -0.81
SS18-210ENST00000578700 SLC35E2BP0CK96 405 aa10□□□□□ -0.81
SS18-210ENST00000578700 ZNF7P17097 686 aaPredicted RBP10□□□□□ -0.81
SS18-210ENST00000578700 BGNP21810 368 aa10□□□□□ -0.81
SS18-210ENST00000578700 GKP32189 559 aa10□□□□□ -0.81
SS18-210ENST00000578700 SPAM1P38567 509 aa10□□□□□ -0.81
SS18-210ENST00000578700 SKIV2L2P42285 1042 aaKnown RBP10□□□□□ -0.81
SS18-210ENST00000578700 TAS2R39P59534 338 aa10□□□□□ -0.81
SS18-210ENST00000578700 SGCGQ13326 291 aa10□□□□□ -0.81
SS18-210ENST00000578700 FGL2Q14314 439 aa10□□□□□ -0.81
SS18-210ENST00000578700 FZD2Q14332 565 aa10□□□□□ -0.81
SS18-210ENST00000578700 PTPRCAPQ14761 206 aa10□□□□□ -0.81
SS18-210ENST00000578700 SETDB1Q15047 1291 aa10□□□□□ -0.81
SS18-210ENST00000578700 GPR33Q49SQ1 333 aa10□□□□□ -0.81
SS18-210ENST00000578700 UGT3A1Q6NUS8 523 aa10□□□□□ -0.81
SS18-210ENST00000578700 C16orf46Q6P387 395 aa10□□□□□ -0.81
SS18-210ENST00000578700 CCDC121Q6ZUS5 278 aa10□□□□□ -0.81
SS18-210ENST00000578700 CLEC14AQ86T13 490 aa10□□□□□ -0.81
SS18-210ENST00000578700 DCP2Q8IU60 420 aaKnown RBP10□□□□□ -0.81
SS18-210ENST00000578700 CRLF3Q8IUI8 442 aa10□□□□□ -0.81
SS18-210ENST00000578700 CBARPQ8N350 705 aaPredicted RBP10□□□□□ -0.81
SS18-210ENST00000578700 TMIEQ8NEW7 156 aa10□□□□□ -0.81
SS18-210ENST00000578700 WDR36Q8NI36 951 aaKnown RBP10□□□□□ -0.81
SS18-210ENST00000578700 EXTL1Q92935 676 aa10□□□□□ -0.81
SS18-210ENST00000578700 GLMNQ92990 594 aa10□□□□□ -0.81
SS18-210ENST00000578700 ECHDC3Q96DC8 303 aa10□□□□□ -0.81
SS18-210ENST00000578700 CCDC126Q96EE4 140 aa10□□□□□ -0.81
SS18-210ENST00000578700 PPP1R16AQ96I34 528 aa10□□□□□ -0.81
SS18-210ENST00000578700 NDNQ99608 321 aa10□□□□□ -0.81
SS18-210ENST00000578700 MRPL57Q9BQC6 102 aaKnown RBP10□□□□□ -0.81
SS18-210ENST00000578700 C12orf65Q9H3J6 166 aaKnown RBP10□□□□□ -0.81
SS18-210ENST00000578700 FAM96AQ9H5X1 160 aa10□□□□□ -0.81
SS18-210ENST00000578700 BPIFA1Q9NP55 256 aa10□□□□□ -0.81
SS18-210ENST00000578700 TAS2R13Q9NYV9 303 aa10□□□□□ -0.81
SS18-210ENST00000578700 PKD2L2Q9NZM6 624 aa10□□□□□ -0.81
SS18-210ENST00000578700 IL17CQ9P0M4 197 aa10□□□□□ -0.81
SS18-210ENST00000578700 TMEM216Q9P0N5 145 aa10□□□□□ -0.81
SS18-210ENST00000578700 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10□□□□□ -0.81
SS18-210ENST00000578700 MARCH4Q9P2E8 410 aaPredicted RBP10□□□□□ -0.81
SS18-210ENST00000578700 COPG2Q9UBF2 871 aa10□□□□□ -0.81
SS18-210ENST00000578700 GULP1Q9UBP9 304 aa10□□□□□ -0.81
SS18-210ENST00000578700 KLF15Q9UIH9 416 aa10□□□□□ -0.81
SS18-210ENST00000578700 CRYL1Q9Y2S2 319 aa10□□□□□ -0.81
SS18-210ENST00000578700 PPIL1Q9Y3C6 166 aa10□□□□□ -0.81
SS18-210ENST00000578700 PCDHGA8Q9Y5G5 932 aa10□□□□□ -0.81
SS18-210ENST00000578700 DOPEY2Q9Y3R5 2298 aa10□□□□□ -0.81
SS18-210ENST00000578700 LRRK2Q5S007 2527 aa10□□□□□ -0.81
SS18-210ENST00000578700 SPTY2D1-AS1A0A0U1RR47 76 aa9.99□□□□□ -0.81
SS18-210ENST00000578700 CDRT15L2A8MXV6 281 aa9.99□□□□□ -0.81
SS18-210ENST00000578700 F8W8V4 182 aa9.99□□□□□ -0.81
SS18-210ENST00000578700 H3BMM5 538 aa9.99□□□□□ -0.81
SS18-210ENST00000578700 FPGTO14772 594 aa9.99□□□□□ -0.81
SS18-210ENST00000578700 EFSO43281 561 aa9.99□□□□□ -0.81
SS18-210ENST00000578700 LEFTY1O75610 366 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms