RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 ARPINQ7Z6K5 226 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 ADGRG6Q86SQ4 1221 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 MYLK4Q86YV6 388 aaPredicted RBP10.9□□□□□ -0.66
SKA2-204ENST00000578519 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.9□□□□□ -0.66
SKA2-204ENST00000578519 SNX31Q8N9S9 440 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 FNDC5Q8NAU1 212 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 OR4F6Q8NGB9 312 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 ARRDC3Q96B67 414 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 RSRC1Q96IZ7 334 aaKnown RBP10.9□□□□□ -0.66
SKA2-204ENST00000578519 FAM129BQ96TA1 746 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 ACOX2Q99424 681 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 C1QTNF7Q9BXJ2 289 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 TRIM15Q9C019 465 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 ACTR8Q9H981 624 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 EBF2Q9HAK2 575 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 TRIM39Q9HCM9 518 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 CD248Q9HCU0 757 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 SDR39U1Q9NRG7 319 aaPredicted RBP10.9□□□□□ -0.66
SKA2-204ENST00000578519 DNAJC11Q9NVH1 559 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 AIG1Q9NVV5 245 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 ADA2Q9NZK5 511 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 LEF1Q9UJU2 399 aaPredicted RBP10.9□□□□□ -0.66
SKA2-204ENST00000578519 SARDHQ9UL12 918 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 GPR34Q9UPC5 381 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 PDE10AQ9Y233 779 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 AP3M1Q9Y2T2 418 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 TIMM22Q9Y584 194 aa10.9□□□□□ -0.66
SKA2-204ENST00000578519 ATP6AP2A0A1C7CYW4 349 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 FAM234BA2RU67 622 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 CLGNO14967 610 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 TAPBPO15533 448 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 MAP3K7O43318 606 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 SLC22A3O75751 556 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 ATP6AP2O75787 350 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 RECQL5O94762 991 aaPredicted RBP10.89□□□□□ -0.67
SKA2-204ENST00000578519 PRR35P0CG20 571 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 HLA-EP13747 358 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 C5AR1P21730 350 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 OPRD1P41143 372 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 PSMD8P48556 350 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 STARD3Q14849 445 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 NR6A1Q15406 480 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 GAB4Q2WGN9 574 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 GGTA1PQ4G0N0 100 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 LRRC73Q5JTD7 316 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 SWT1Q5T5J6 900 aaKnown RBP10.89□□□□□ -0.67
SKA2-204ENST00000578519 WLSQ5T9L3 541 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 REP15Q6BDI9 236 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 GK5Q6ZS86 529 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 RFLNAQ6ZTI6 216 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 GLB1L3Q8NCI6 653 aaPredicted RBP10.89□□□□□ -0.67
SKA2-204ENST00000578519 FBXO15Q8NCQ5 510 aaPredicted RBP10.89□□□□□ -0.67
SKA2-204ENST00000578519 PHC3Q8NDX5 983 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 DNAJB8Q8NHS0 232 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 MARK4Q96L34 752 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 GDF15Q99988 308 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 WRAP53Q9BUR4 548 aaKnown RBP10.89□□□□□ -0.67
SKA2-204ENST00000578519 BRINP2Q9C0B6 783 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 TNFRSF12AQ9NP84 129 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 SPAG4Q9NPE6 437 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 PRSS16Q9NQE7 514 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 TSR3Q9UJK0 312 aaKnown RBP10.89□□□□□ -0.67
SKA2-204ENST00000578519 ADAMTS6Q9UKP5 1117 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 MAPRE3Q9UPY8 281 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 POMPQ9Y244 141 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 BTRCQ9Y297 605 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 STON1Q9Y6Q2 735 aa10.89□□□□□ -0.67
SKA2-204ENST00000578519 SERTM1A2A2V5 107 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 CCDC154A6NI56 674 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 ZNF839A8K0R7 811 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 GPR89AB7ZAQ6 455 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 H0Y3Z8 333 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 H3BM21 787 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 PPP6CO00743 305 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 OR7A17O14581 309 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 PSIP1O75475 530 aaKnown RBP10.88□□□□□ -0.67
SKA2-204ENST00000578519 RPN2P04844 631 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 GPR89BP0CG08 455 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 PRPS2P11908 318 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 C6P13671 934 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 TEAD1P28347 426 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 BMP8BP34820 402 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 IL12RB1P42701 662 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 GNPDA1P46926 289 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 FOXA1P55317 472 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 RPA4Q13156 261 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 PRKG2Q13237 762 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 LRP8Q14114 963 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 GRM2Q14416 872 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 GRIN2CQ14957 1233 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 PHKG1Q16816 387 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 MUM1Q2TAK8 710 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 C6orf136Q5SQH8 315 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 C10orf62Q5T681 223 aaPredicted RBP10.88□□□□□ -0.67
SKA2-204ENST00000578519 LIPJQ5W064 366 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 ZNF776Q68DI1 518 aaPredicted RBP10.88□□□□□ -0.67
SKA2-204ENST00000578519 ADAMTSL4Q6UY14 1074 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 MMAAQ8IVH4 418 aaKnown RBP10.88□□□□□ -0.67
SKA2-204ENST00000578519 CHPFQ8IZ52 775 aa10.88□□□□□ -0.67
SKA2-204ENST00000578519 ZNF366Q8N895 744 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms