RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 TSSK4Q6SA08 328 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 UNC5DQ6UXZ4 953 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 NAPRTQ6XQN6 538 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 UBE2R2Q712K3 238 aaPredicted RBP13.13□□□□□ -0.31
SRSF1-202ENST00000578430 CHST15Q7LFX5 561 aaPredicted RBP13.13□□□□□ -0.31
SRSF1-202ENST00000578430 VRK3Q8IV63 474 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 FBXO39Q8N4B4 442 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 OR6Y1Q8NGX8 325 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 MAGEC3Q8TD91 643 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 MCOLN3Q8TDD5 553 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 SKA2Q8WVK7 121 aaPredicted RBP13.13□□□□□ -0.31
SRSF1-202ENST00000578430 NELL1Q92832 810 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 CHMP6Q96FZ7 201 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 HIST1H2AHQ96KK5 128 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 SLC6A18Q96N87 628 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 HIST1H2AJQ99878 128 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 H2AFJQ9BTM1 129 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 MECRQ9BV79 373 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 PARVBQ9HBI1 364 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 CYP4F12Q9HCS2 524 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 SLC23A2Q9UGH3 650 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 MOSPD1Q9UJG1 213 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 GPSM3Q9Y4H4 160 aa13.13□□□□□ -0.31
SRSF1-202ENST00000578430 EML5Q05BV3 1969 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 GMNCA6NCL1 334 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 PRR5-ARHGAP8B1AHC4 643 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 TMEM114B3SHH9 223 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 UBXN8O00124 270 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 IFRD1O00458 451 aaPredicted RBP13.12□□□□□ -0.31
SRSF1-202ENST00000578430 FFAR2O15552 330 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 RPN2P04844 631 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 ACP5P13686 325 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 GFAPP14136 432 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 IMPDH1P20839 514 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 IDSP22304 550 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 MAP4P27816 1152 aaKnown RBP13.12□□□□□ -0.31
SRSF1-202ENST00000578430 PREPP48147 710 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 NFE2L1Q14494 772 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 ALG11Q2TAA5 492 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 PLA2G4EQ3MJ16 856 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 TTC19Q6DKK2 380 aaPredicted RBP13.12□□□□□ -0.31
SRSF1-202ENST00000578430 SULT1C3Q6IMI6 304 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 XKR5Q6UX68 686 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 WASH2PQ6VEQ5 465 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 PDZD3Q86UT5 571 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 TMEFF1Q8IYR6 380 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 TCAIMQ8N3R3 496 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 PDPRQ8NCN5 879 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 C1orf216Q8TAB5 229 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 L3HYPDHQ96EM0 354 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 PDXPQ96GD0 296 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 ZNF317Q96PQ6 595 aaPredicted RBP13.12□□□□□ -0.31
SRSF1-202ENST00000578430 PRRX2Q99811 253 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 TRMOQ9BU70 441 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 OR52A5Q9H2C5 316 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 TM9SF3Q9HD45 589 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 WASH6PQ9NQA3 447 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 KLC4Q9NSK0 619 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 THAP1Q9NVV9 213 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 NCKIPSDQ9NZQ3 722 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 CD274Q9NZQ7 290 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 IKZF3Q9UKT9 509 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 PRKAB1Q9Y478 270 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 PCYT1BQ9Y5K3 369 aaPredicted RBP13.12□□□□□ -0.31
SRSF1-202ENST00000578430 TNPO3Q9Y5L0 923 aaKnown RBP13.12□□□□□ -0.31
SRSF1-202ENST00000578430 CACNA1IQ9P0X4 2223 aa13.12□□□□□ -0.31
SRSF1-202ENST00000578430 MYO15AQ9UKN7 3530 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 TCP11X1B4DZS4 312 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 TLR4O00206 839 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 VILLO15195 856 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 NPHS1O60500 1241 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 VIMP08670 466 aaKnown RBP13.11□□□□□ -0.31
SRSF1-202ENST00000578430 ANXA5P08758 320 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 SLC35G4P0C7Q5 338 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 ACADLP28330 430 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 PDHA2P29803 388 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 AVPR2P30518 371 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 DPP6P42658 865 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 RPIAP49247 311 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 HNMTP50135 292 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 HK3P52790 923 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 HERVK_113P63132 956 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 ABRQ12979 859 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 FZD2Q14332 565 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 SETDB1Q15047 1291 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 TPRG1LQ5T0D9 272 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 PMS2CLQ68D20 193 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 FAM83HQ6ZRV2 1179 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-202ENST00000578430 PARGQ86W56 976 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 SPNS2Q8IVW8 549 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 RGL4Q8IZJ4 473 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 KIRREL3Q8IZU9 778 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 SLC22A18ASQ8N1D0 253 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 DEFB119Q8N690 84 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 LILRA3Q8N6C8 439 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-202ENST00000578430 PTGR2Q8N8N7 351 aaPredicted RBP13.11□□□□□ -0.31
SRSF1-202ENST00000578430 ATL1Q8WXF7 558 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 CNDP1Q96KN2 507 aa13.11□□□□□ -0.31
SRSF1-202ENST00000578430 C1QTNF3Q9BXJ4 246 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms