RNA–Protein interactions for RNA: ENST00000575942.1

PAM16-213, Transcript of presequence translocase associated motor 16, humanhuman

TSL 3

Gene PAM16, Length 806 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAM16-213ENST00000575942 TBL1YQ9BQ87 522 aa13.16□□□□□ -0.3
PAM16-213ENST00000575942 VPS37BQ9H9H4 285 aa13.16□□□□□ -0.3
PAM16-213ENST00000575942 AKIRIN1Q9H9L7 192 aaPredicted RBP13.16□□□□□ -0.3
PAM16-213ENST00000575942 LATS2Q9NRM7 1088 aa13.16□□□□□ -0.3
PAM16-213ENST00000575942 C1GALT1Q9NS00 363 aa13.16□□□□□ -0.3
PAM16-213ENST00000575942 R3HDM2Q9Y2K5 976 aaKnown RBP13.16□□□□□ -0.3
PAM16-213ENST00000575942 RELNP78509 3460 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 MAST4O15021 2626 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 SPTBP11277 2137 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 NAV2Q8IVL1 2488 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 CYSRT1A8MQ03 144 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 IFRD1O00458 451 aaPredicted RBP13.15□□□□□ -0.3
PAM16-213ENST00000575942 ARCN1P48444 511 aaKnown RBP13.15□□□□□ -0.3
PAM16-213ENST00000575942 ZNF140P52738 457 aaPredicted RBP13.15□□□□□ -0.3
PAM16-213ENST00000575942 RPS18P62269 152 aaKnown RBP13.15□□□□□ -0.3
PAM16-213ENST00000575942 MSLNQ13421 630 aaPredicted RBP13.15□□□□□ -0.3
PAM16-213ENST00000575942 RPS6KA1Q15418 735 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 ZNF449Q6P9G9 518 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 ATCAYQ86WG3 371 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 LILRA3Q8N6C8 439 aaPredicted RBP13.15□□□□□ -0.3
PAM16-213ENST00000575942 LCN9Q8WX39 176 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 CPT1BQ92523 772 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 LRFN5Q96NI6 719 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 ALS2CR12Q96Q35 445 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 FERD3LQ96RJ6 166 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 RUFY1Q96T51 708 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 TLR10Q9BXR5 811 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 SRMSQ9H3Y6 488 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 COG4Q9H9E3 785 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 ARNT2Q9HBZ2 717 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 SYTL2Q9HCH5 934 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 ZDHHC3Q9NYG2 299 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 POMT2Q9UKY4 750 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 FARSAQ9Y285 508 aaKnown RBP13.15□□□□□ -0.3
PAM16-213ENST00000575942 COL12A1Q99715 3063 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 FLNCQ14315 2725 aa13.15□□□□□ -0.3
PAM16-213ENST00000575942 TNRC6AQ8NDV7 1962 aaKnown RBP13.14□□□□□ -0.31
PAM16-213ENST00000575942 GSAPA4D1B5 854 aa13.14□□□□□ -0.31
PAM16-213ENST00000575942 K7EM74 188 aa13.14□□□□□ -0.31
PAM16-213ENST00000575942 MAP3K7O43318 606 aa13.14□□□□□ -0.31
PAM16-213ENST00000575942 MC4RP32245 332 aa13.14□□□□□ -0.31
PAM16-213ENST00000575942 GPS2Q13227 327 aa13.14□□□□□ -0.31
PAM16-213ENST00000575942 IZUMO3Q5VZ72 239 aa13.14□□□□□ -0.31
PAM16-213ENST00000575942 DENND5AQ6IQ26 1287 aa13.14□□□□□ -0.31
PAM16-213ENST00000575942 FBXO38Q6PIJ6 1188 aa13.14□□□□□ -0.31
PAM16-213ENST00000575942 ZNF517Q6ZMY9 492 aaPredicted RBP13.14□□□□□ -0.31
PAM16-213ENST00000575942 TRIM58Q8NG06 486 aa13.14□□□□□ -0.31
PAM16-213ENST00000575942 MIB2Q96AX9 1013 aa13.14□□□□□ -0.31
PAM16-213ENST00000575942 PPM1MQ96MI6 270 aa13.14□□□□□ -0.31
PAM16-213ENST00000575942 FAM96AQ9H5X1 160 aa13.14□□□□□ -0.31
PAM16-213ENST00000575942 ANKMY1Q9P2S6 941 aa13.14□□□□□ -0.31
PAM16-213ENST00000575942 SPENQ96T58 3664 aaKnown RBP13.14□□□□□ -0.31
PAM16-213ENST00000575942 MED13Q9UHV7 2174 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 IGLV3-16A0A075B6K0 115 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 GOLGA6L9A6NEM1 432 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 SLC9B1P1A6NJY1 282 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 H7C0S8 307 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 LDB2O43679 373 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 DNAJB5O75953 348 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 GSTM1P09488 218 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 RAB40ALP0C0E4 278 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 ACRV1P26436 265 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 CD151P48509 253 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 GSTM4Q03013 218 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 SRSF1Q07955 248 aaKnown RBP eCLIP13.13□□□□□ -0.31
PAM16-213ENST00000575942 RPA4Q13156 261 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 SPARCL1Q14515 664 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 ZRANB3Q5FWF4 1079 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 SEL1L2Q5TEA6 688 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 ARHGEF18Q6ZSZ5 1173 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 SERPINA9Q86WD7 417 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 KLHDC8BQ8IXV7 354 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 DSELQ8IZU8 1212 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 TTC13Q8NBP0 860 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 UBE2Q2Q8WVN8 375 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 CLIP3Q96DZ5 547 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 DNAJC1Q96KC8 554 aaKnown RBP13.13□□□□□ -0.31
PAM16-213ENST00000575942 TRIM55Q9BYV6 548 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 CHST8Q9H2A9 424 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 OR52A5Q9H2C5 316 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 TFB2MQ9H5Q4 396 aaKnown RBP13.13□□□□□ -0.31
PAM16-213ENST00000575942 MVB12BQ9H7P6 319 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 ACSS2Q9NR19 701 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 TRMT1Q9NXH9 659 aaKnown RBP13.13□□□□□ -0.31
PAM16-213ENST00000575942 PLAAQ9Y263 795 aa13.13□□□□□ -0.31
PAM16-213ENST00000575942 PCDHGA9Q9Y5G4 932 aaKnown RBP13.13□□□□□ -0.31
PAM16-213ENST00000575942 TRBV5-4A0A0C4DH59 114 aa13.12□□□□□ -0.31
PAM16-213ENST00000575942 ARGFXA6NJG6 315 aa13.12□□□□□ -0.31
PAM16-213ENST00000575942 USP27XA6NNY8 438 aa13.12□□□□□ -0.31
PAM16-213ENST00000575942 TMEM150CB9EJG8 249 aa13.12□□□□□ -0.31
PAM16-213ENST00000575942 MEN1O00255 615 aa13.12□□□□□ -0.31
PAM16-213ENST00000575942 CCL22O00626 93 aa13.12□□□□□ -0.31
PAM16-213ENST00000575942 ZSCAN12O43309 604 aa13.12□□□□□ -0.31
PAM16-213ENST00000575942 MSL3P1P0C860 447 aa13.12□□□□□ -0.31
PAM16-213ENST00000575942 PRDX3P30048 256 aaKnown RBP13.12□□□□□ -0.31
PAM16-213ENST00000575942 PREPP48147 710 aa13.12□□□□□ -0.31
PAM16-213ENST00000575942 CD97P48960 835 aa13.12□□□□□ -0.31
PAM16-213ENST00000575942 PGDP52209 483 aa13.12□□□□□ -0.31
PAM16-213ENST00000575942 MLLT10P55197 1068 aa13.12□□□□□ -0.31
PAM16-213ENST00000575942 IL10RAQ13651 578 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms