RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 ENO3P13929 434 aaPredicted RBP13.65□□□□□ -0.22
RPAIN-217ENST00000575711 ACADLP28330 430 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 NDUFS1P28331 727 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 CBSP35520 551 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 MSH2P43246 934 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 RGS4P49798 205 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 SIM1P81133 766 aaPredicted RBP13.65□□□□□ -0.22
RPAIN-217ENST00000575711 ABRQ12979 859 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 GBX1Q14549 363 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 PUM1Q14671 1186 aaKnown RBP eCLIP13.65□□□□□ -0.22
RPAIN-217ENST00000575711 USP10Q14694 798 aaKnown RBP13.65□□□□□ -0.22
RPAIN-217ENST00000575711 CCDC157Q569K6 752 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 ACSBG2Q5FVE4 666 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 DUS1LQ6P1R4 473 aaKnown RBP13.65□□□□□ -0.22
RPAIN-217ENST00000575711 TAOK1Q7L7X3 1001 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 ZNF438Q7Z4V0 828 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 PIM3Q86V86 326 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 CPNE9Q8IYJ1 553 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 TSPAN17Q96FV3 270 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 FOPNLQ96NB1 174 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 FERD3LQ96RJ6 166 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 PAFAH2Q99487 392 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 SLC38A3Q99624 504 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 GPR22Q99680 433 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 SLC40A1Q9NP59 571 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 SLC39A10Q9ULF5 831 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 APOBEC2Q9Y235 224 aaKnown RBP13.65□□□□□ -0.22
RPAIN-217ENST00000575711 ASF1AQ9Y294 204 aa13.65□□□□□ -0.22
RPAIN-217ENST00000575711 EIF3FO00303 357 aaPredicted RBP13.64□□□□□ -0.23
RPAIN-217ENST00000575711 GIPC1O14908 333 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 RPN2P04844 631 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 CDK4P11802 303 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 GPR3P46089 330 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 SERPINB9P50453 376 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 TAS2R39P59534 338 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 TIAL1Q01085 375 aaKnown RBP eCLIP13.64□□□□□ -0.23
RPAIN-217ENST00000575711 NR1D2Q14995 579 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 PERM1Q5SV97 790 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 LRRC8EQ6NSJ5 796 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 PAQR3Q6TCH7 311 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 UNC5DQ6UXZ4 953 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 TMEM26Q6ZUK4 368 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 NEK10Q6ZWH5 1172 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 ACVR1CQ8NER5 493 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 CFAP61Q8NHU2 1237 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 ZFPM2Q8WW38 1151 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 CCDC3Q9BQI4 270 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 TRIT1Q9H3H1 467 aaKnown RBP13.64□□□□□ -0.23
RPAIN-217ENST00000575711 MVB12BQ9H7P6 319 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 UCK1Q9HA47 277 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 POPDC3Q9HBV1 291 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 SYTL2Q9HCH5 934 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 TOR4AQ9NXH8 423 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 KCNK4Q9NYG8 393 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 FETUBQ9UGM5 382 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 TSR3Q9UJK0 312 aaKnown RBP13.64□□□□□ -0.23
RPAIN-217ENST00000575711 WDR87Q6ZQQ6 2873 aa13.64□□□□□ -0.23
RPAIN-217ENST00000575711 PRAMEF33A0A0G2JMD5 474 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 LILRA5A6NI73 299 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 ERLIN1O75477 346 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 KRT38O76015 456 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 FTH1P19P0C7X4 201 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 MPC1LP0DKB6 136 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 STMN1P16949 149 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 CNTFP26441 200 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 ALDH4A1P30038 563 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 HSD17B3P37058 310 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 MAPK9P45984 424 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 ID4P47928 161 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 PPM1FP49593 454 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-217ENST00000575711 IL2P60568 153 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 E2F1Q01094 437 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 GPR18Q14330 331 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 PLCL1Q15111 1095 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 LGSNQ5TDP6 509 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 MROH9Q5TGP6 573 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 SPRED1Q7Z699 444 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 ZNF761Q86XN6 746 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-217ENST00000575711 TBC1D21Q8IYX1 336 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 MYO1HQ8N1T3 1032 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 Q8N9G6 341 aaPredicted RBP13.63□□□□□ -0.23
RPAIN-217ENST00000575711 PHC3Q8NDX5 983 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 OR5K2Q8NHB8 316 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 LINGO1Q96FE5 620 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 HGH1Q9BTY7 390 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 ABCG4Q9H172 646 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 KIR3DX1Q9H7L2 352 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 CAB39LQ9H9S4 337 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 GPAMQ9HCL2 828 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 POLG2Q9UHN1 485 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 ZNF180Q9UJW8 692 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 PIKFYVEQ9Y2I7 2098 aa13.63□□□□□ -0.23
RPAIN-217ENST00000575711 ZFC3H1O60293 1989 aaKnown RBP13.63□□□□□ -0.23
RPAIN-217ENST00000575711 ARID1BQ8NFD5 2236 aaPredicted RBP13.62□□□□□ -0.23
RPAIN-217ENST00000575711 KDM1AO60341 852 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 ZNF37AP17032 561 aaPredicted RBP13.62□□□□□ -0.23
RPAIN-217ENST00000575711 PGGT1BP53609 377 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 EPHA4P54764 986 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 OR1D5P58170 312 aa13.62□□□□□ -0.23
RPAIN-217ENST00000575711 RAB10P61026 200 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms