RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 CAPRIN2Q6IMN6 1127 aaKnown RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 IRGCQ6NXR0 463 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 C19orf48Q6RUI8 117 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 LRRC69Q6ZNQ3 347 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 ZNF248Q8NDW4 579 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 PARD6BQ9BYG5 372 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 FAM129AQ9BZQ8 928 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 OR52A5Q9H2C5 316 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 ARGLU1Q9NWB6 273 aaPredicted RBP12.94□□□□□ -0.34
RPAIN-216ENST00000575599 IL1RAPL1Q9NZN1 696 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 COLEC10Q9Y6Z7 277 aa12.94□□□□□ -0.34
RPAIN-216ENST00000575599 A0A087WV48 116 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 UBA6A0AVT1 1052 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-216ENST00000575599 EFCAB7A8K855 629 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 IQCF5A8MTL0 148 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 SMAPO00193 183 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 PRMT5O14744 637 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-216ENST00000575599 LIN7AO14910 233 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-216ENST00000575599 PRAMEF10O60809 474 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 NDUFS3O75489 264 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 RASSF9O75901 435 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 ITPKBP27987 946 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 LEPRP48357 1165 aaKnown RBP12.93□□□□□ -0.34
RPAIN-216ENST00000575599 ITGA8P53708 1063 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 RPA4Q13156 261 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 KIAA0930Q6ICG6 404 aaPredicted RBP12.93□□□□□ -0.34
RPAIN-216ENST00000575599 MRNIPQ6NTE8 343 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 WDR93Q6P2C0 686 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 FAM92BQ6ZTR7 304 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 CLEC14AQ86T13 490 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 KRT222Q8N1A0 295 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 LKAAEAR1Q8TD35 194 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 KCNE4Q8WWG9 221 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 USP7Q93009 1102 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 FERD3LQ96RJ6 166 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 TSSK1BQ9BXA7 367 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 KIR3DX1Q9H7L2 352 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 OCIAD1Q9NX40 245 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 FOXJ2Q9P0K8 574 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 PDP2Q9P2J9 529 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 SLC24A2Q9UI40 661 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 HEBP2Q9Y5Z4 205 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 RPS6KL1Q9Y6S9 549 aa12.93□□□□□ -0.34
RPAIN-216ENST00000575599 URB1O60287 2271 aaKnown RBP12.92□□□□□ -0.34
RPAIN-216ENST00000575599 FAM237BA0A1B0GVD1 139 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 SEC31AO94979 1220 aaKnown RBP12.92□□□□□ -0.34
RPAIN-216ENST00000575599 C9P02748 559 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 FGF3P11487 239 aaPredicted RBP12.92□□□□□ -0.34
RPAIN-216ENST00000575599 NDUFS1P28331 727 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 MAGEA3P43357 314 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 ABCG1P45844 678 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 SEPHS1P49903 392 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 EIF3BP55884 814 aaKnown RBP12.92□□□□□ -0.34
RPAIN-216ENST00000575599 PPP1CAP62136 330 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 MORF4L2Q15014 288 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 ANKRD20A4Q4UJ75 823 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 PTRHD1Q6GMV3 140 aaKnown RBP12.92□□□□□ -0.34
RPAIN-216ENST00000575599 KLHL35Q6PF15 583 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 CEP128Q6ZU80 1094 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 ARHGAP22Q7Z5H3 698 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 SDCCAG8Q86SQ7 713 aaPredicted RBP12.92□□□□□ -0.34
RPAIN-216ENST00000575599 PDZD3Q86UT5 571 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 AGGF1Q8N302 714 aaeCLIP12.92□□□□□ -0.34
RPAIN-216ENST00000575599 PHC3Q8NDX5 983 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 ART4Q93070 314 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 PMEPA1Q969W9 287 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 STAMBPL1Q96FJ0 436 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 C9orf72Q96LT7 481 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 FCRL3Q96P31 734 aaPredicted RBP12.92□□□□□ -0.34
RPAIN-216ENST00000575599 HGH1Q9BTY7 390 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 TSPYL1Q9H0U9 437 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 GNPTGQ9UJJ9 305 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 NFU1Q9UMS0 254 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 PCDHGA7Q9Y5G6 932 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 CACNA1BQ00975 2339 aa12.92□□□□□ -0.34
RPAIN-216ENST00000575599 LAMA5O15230 3695 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 MAGEB16A2A368 324 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 OR5K3A6NET4 321 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 C9orf172C9J069 976 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 KIF1CO43896 1103 aaKnown RBP12.91□□□□□ -0.34
RPAIN-216ENST00000575599 BANF1O75531 89 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 F7P08709 466 aaPredicted RBP12.91□□□□□ -0.34
RPAIN-216ENST00000575599 TNFRSF8P28908 595 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 CCR7P32248 378 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 ARCN1P48444 511 aaKnown RBP12.91□□□□□ -0.34
RPAIN-216ENST00000575599 CD151P48509 253 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 CARSP49589 748 aaKnown RBP12.91□□□□□ -0.34
RPAIN-216ENST00000575599 VSNL1P62760 191 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 HSPA14Q0VDF9 509 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 THOC5Q13769 683 aaKnown RBP12.91□□□□□ -0.34
RPAIN-216ENST00000575599 COL28A1Q2UY09 1125 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 TMEM164Q5U3C3 297 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 CACHD1Q5VU97 1274 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 ARMC3Q5W041 872 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 HOOK3Q86VS8 718 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 OOSP2Q86WS3 158 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 SPACA3Q8IXA5 215 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 EIF1ADQ8N9N8 165 aaKnown RBP12.91□□□□□ -0.34
RPAIN-216ENST00000575599 ACVR1CQ8NER5 493 aa12.91□□□□□ -0.34
RPAIN-216ENST00000575599 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.91□□□□□ -0.342e-7■■■■■ 32.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms