RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 SLC16A12Q6ZSM3 486 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 MUL1Q969V5 352 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 NODALQ96S42 347 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 C3orf18Q9UK00 162 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 INVSQ9Y283 1065 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 DHRS7Q9Y394 339 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 CCL27Q9Y4X3 112 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 PLXNA3P51805 1871 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 FFAR3O14843 346 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 GPR42O15529 346 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 ACSL4O60488 711 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 SERPINB7O75635 380 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 INMTO95050 263 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 MSH3P20585 1137 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 CDH3P22223 829 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 GGT5P36269 586 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 OPRL1P41146 370 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 PIK3CGP48736 1102 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 KPNA1P52294 538 aaPredicted RBP15.36■□□□□ 0.05
NUP88-207ENST00000573584 ISL1P61371 349 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 TOP3AQ13472 1001 aaPredicted RBP15.36■□□□□ 0.05
NUP88-207ENST00000573584 SPANXN4Q5MJ08 99 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 ADHFE1Q8IWW8 467 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 EID3Q8N140 333 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 FRS2Q8WU20 508 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 NCLNQ969V3 563 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 PDLIM5Q96HC4 596 aaKnown RBP15.36■□□□□ 0.05
NUP88-207ENST00000573584 ZNF347Q96SE7 839 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 NEURL2Q9BR09 285 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 DPY30Q9C005 99 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 ZFP14Q9HCL3 533 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 SLC25A37Q9NYZ2 338 aa15.36■□□□□ 0.05
NUP88-207ENST00000573584 GBF1Q92538 1859 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 RGS14O43566 566 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 SCELO95171 688 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 CDH4P55283 916 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 GSTM4Q03013 218 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 OCA2Q04671 838 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 CYP2A13Q16696 494 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 C5orf22Q49AR2 442 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 GCNT7Q6ZNI0 430 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 FKBP9P1Q75LS8 142 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 PIWIL3Q7Z3Z3 882 aaKnown RBP15.35■□□□□ 0.05
NUP88-207ENST00000573584 TMEM179BQ7Z7N9 219 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 MSRB3Q8IXL7 192 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 SH3YL1Q96HL8 342 aaPredicted RBP15.35■□□□□ 0.05
NUP88-207ENST00000573584 SH3GL1Q99961 368 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 EXD2Q9NVH0 621 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 TRNAU1APQ9NX07 287 aaKnown RBP15.35■□□□□ 0.05
NUP88-207ENST00000573584 SCN10AQ9Y5Y9 1956 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 SLC1A7O00341 560 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 RAD51BO15315 384 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 INPPL1O15357 1258 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 PGRP06401 933 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 DCTP40126 519 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 HMGCS1Q01581 520 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 CLLU1OSQ5K130 101 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 PHACTR4Q8IZ21 702 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 RHBDF1Q96CC6 855 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 P2RY12Q9H244 342 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 CRISPLD1Q9H336 500 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 SPC25Q9HBM1 224 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 ENPP5Q9UJA9 477 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 U3KQV3 271 aa15.35■□□□□ 0.05
NUP88-207ENST00000573584 CLDN25C9JDP6 229 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 H3BNC9 293 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 PRMT5O14744 637 aaPredicted RBP15.34■□□□□ 0.05
NUP88-207ENST00000573584 IGHA2P01877 340 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 F11P03951 625 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 IL6P05231 212 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 IDUAP35475 653 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 KCNC4Q03721 635 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 PON2Q15165 354 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 FAM171A1Q5VUB5 890 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 ABI1Q8IZP0 508 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 STK40Q8N2I9 435 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 LIX1Q8N485 282 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 TTC30BQ8N4P2 665 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 KRTCAP2Q8N6L1 136 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 OR5K1Q8NHB7 308 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 FARSBQ9NSD9 589 aaKnown RBP15.34■□□□□ 0.05
NUP88-207ENST00000573584 DCAF13Q9NV06 445 aaKnown RBP15.34■□□□□ 0.05
NUP88-207ENST00000573584 PAK1IP1Q9NWT1 392 aaPredicted RBP15.34■□□□□ 0.05
NUP88-207ENST00000573584 ANGPTL3Q9Y5C1 460 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 TMEM189-UBE2V1I3L0A0 370 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 ITIH1P19827 911 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 GDF5P43026 501 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 RAD23AP54725 363 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 MTA1Q13330 715 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 TAF1CQ15572 869 aaPredicted RBP15.34■□□□□ 0.05
NUP88-207ENST00000573584 TRIM16LQ309B1 348 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 RUNDC3AQ59EK9 446 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 SGO1Q5FBB7 561 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 MICU2Q8IYU8 434 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 CIPCQ9C0C6 399 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 MAGEE1Q9HCI5 957 aa15.34■□□□□ 0.05
NUP88-207ENST00000573584 H7C0S8 307 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 NDUFS2O75306 463 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 ULK1O75385 1050 aa15.33■□□□□ 0.05
NUP88-207ENST00000573584 CREG1O75629 220 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms