RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 MVDP53602 400 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 B4GALNT1Q00973 533 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 ALKBH1Q13686 389 aaKnown RBP5.46□□□□□ -1.54
SF3B3-214ENST00000572365 BAK1Q16611 211 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 ZSCAN23Q3MJ62 389 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 LINC00303Q3SY05 128 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 C10orf76Q5T2E6 689 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 OLFML1Q6UWY5 402 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 SERPINA13PQ6UXR4 307 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 RANBP10Q6VN20 620 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 RSRC2Q7L4I2 434 aaKnown RBP5.46□□□□□ -1.54
SF3B3-214ENST00000572365 RABEPKQ7Z6M1 372 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 CHD1LQ86WJ1 897 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 RFX6Q8HWS3 928 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 HSCBQ8IWL3 235 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 ZNF248Q8NDW4 579 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 WBP2Q969T9 261 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 SENP8Q96LD8 212 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 PAIP1Q9H074 479 aaKnown RBP5.46□□□□□ -1.54
SF3B3-214ENST00000572365 CDT1Q9H211 546 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 KLK15Q9H2R5 256 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 THAP1Q9NVV9 213 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 CWC15Q9P013 229 aaKnown RBP5.46□□□□□ -1.54
SF3B3-214ENST00000572365 SH3BP4Q9P0V3 963 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 KCNJ14Q9UNX9 436 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 LRRK1Q38SD2 2015 aa5.46□□□□□ -1.54
SF3B3-214ENST00000572365 TRAV19A0A0A6YYK7 116 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 ESYT2A0FGR8 921 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 OR6C75A6NL08 312 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 CCDC169A6NNP5 214 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 DKC1O60832 514 aaKnown RBP eCLIP5.45□□□□□ -1.54
SF3B3-214ENST00000572365 NFATC1O95644 943 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 AFPP02771 609 aaKnown RBP5.45□□□□□ -1.54
SF3B3-214ENST00000572365 ENO1P06733 434 aaKnown RBP5.45□□□□□ -1.54
SF3B3-214ENST00000572365 ALDOCP09972 364 aaKnown RBP5.45□□□□□ -1.54
SF3B3-214ENST00000572365 HAPLN1P10915 354 aaPredicted RBP5.45□□□□□ -1.54
SF3B3-214ENST00000572365 LYL1P12980 280 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 TGM2P21980 687 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 ACAT1P24752 427 aaKnown RBP5.45□□□□□ -1.54
SF3B3-214ENST00000572365 IDUAP35475 653 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 PGM1P36871 562 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 ACVRL1P37023 503 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 SSR1P43307 286 aaKnown RBP5.45□□□□□ -1.54
SF3B3-214ENST00000572365 RXRGP48443 463 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 TUFMP49411 452 aaKnown RBP5.45□□□□□ -1.54
SF3B3-214ENST00000572365 AKAP17AQ02040 695 aaKnown RBP5.45□□□□□ -1.54
SF3B3-214ENST00000572365 DCAF4L1Q3SXM0 396 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 RUNDC3AQ59EK9 446 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 XKR4Q5GH76 650 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 AMIGO2Q86SJ2 522 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 SCN4BQ8IWT1 228 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 DHX40Q8IX18 779 aaKnown RBP5.45□□□□□ -1.54
SF3B3-214ENST00000572365 KCNE4Q8WWG9 221 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 DNASE2BQ8WZ79 361 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 WBP1Q96G27 269 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 RITA1Q96K30 269 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 MYCBPQ99417 103 aaPredicted RBP5.45□□□□□ -1.54
SF3B3-214ENST00000572365 NFKBIZQ9BYH8 718 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 TRIM2Q9C040 744 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 NUAK2Q9H093 628 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 C6orf106Q9H6K1 298 aaPredicted RBP5.45□□□□□ -1.54
SF3B3-214ENST00000572365 PREBQ9HCU5 417 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 TLR8Q9NR97 1041 aaKnown RBP5.45□□□□□ -1.54
SF3B3-214ENST00000572365 SLC38A7Q9NVC3 462 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 ASB6Q9NWX5 421 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 WSB2Q9NYS7 404 aaPredicted RBP5.45□□□□□ -1.54
SF3B3-214ENST00000572365 GCNT4Q9P109 453 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 CGNQ9P2M7 1197 aaKnown RBP5.45□□□□□ -1.54
SF3B3-214ENST00000572365 KLQ9UEF7 1012 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 MAFFQ9ULX9 164 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 CYP46A1Q9Y6A2 500 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 F8P00451 2351 aa5.45□□□□□ -1.54
SF3B3-214ENST00000572365 FAM90A7PA6NKC0 464 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 FAM90A22PA8MWA6 464 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 FAM90A12PA8MX19 464 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 FAM90A23PA8MXZ1 464 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 LACTBL1A8MY62 500 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 HMGB1P1B2RPK0 211 aaPredicted RBP5.44□□□□□ -1.54
SF3B3-214ENST00000572365 K7ERI5 159 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 DSCR3O14972 297 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 CASC3O15234 703 aaKnown RBP5.44□□□□□ -1.54
SF3B3-214ENST00000572365 USP12O75317 370 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 GUCY1B2O75343 617 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 TULP3O75386 442 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 ZNF883P0CG24 379 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 CXCL8P10145 99 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 IRF1P10914 325 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 KCNE1P15382 129 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 ITGB6P18564 788 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 MATR3P43243 847 aaKnown RBP eCLIP5.44□□□□□ -1.54
SF3B3-214ENST00000572365 TNFRSF4P43489 277 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 RPS6KA3P51812 740 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 ADPRHP54922 357 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 DPTQ07507 201 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 GALNT2Q10471 571 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 KPNB1Q14974 876 aaKnown RBP5.44□□□□□ -1.54
SF3B3-214ENST00000572365 KLHL40Q2TBA0 621 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 AWAT1Q58HT5 328 aa5.44□□□□□ -1.54
SF3B3-214ENST00000572365 EARS2Q5JPH6 523 aaKnown RBP5.44□□□□□ -1.54
SF3B3-214ENST00000572365 TEX35Q5T0J7 233 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms