RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 SP140Q13342 867 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 FZD2Q14332 565 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 NFE2L1Q14494 772 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 KRT33BQ14525 404 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 CCDC153Q494R4 210 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 PYCR3Q53H96 274 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 TTMPQ5BVD1 217 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 TRIM61Q5EBN2 209 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 PRRT3Q5FWE3 981 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 TPRG1LQ5T0D9 272 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 TTC23LQ6PF05 361 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLC30A9Q6PML9 568 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 PAQR3Q6TCH7 311 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 NAPRTQ6XQN6 538 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 PIWIL4Q7Z3Z4 852 aaKnown RBP6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 TAF8Q7Z7C8 310 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 PDZD3Q86UT5 571 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 TAX1BP1Q86VP1 789 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 GKN2Q86XP6 184 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 ZNF547Q8IVP9 402 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 TRIM48Q8IWZ4 208 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 CFAP206Q8IYR0 622 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 RAB42Q8N4Z0 105 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 ANKRD42Q8N9B4 389 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 AVL9Q8NBF6 648 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 ACVR1CQ8NER5 493 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 GIMAP7Q8NHV1 300 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 MAGEC3Q8TD91 643 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 MZB1Q8WU39 189 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 KCTD4Q8WVF5 259 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 DYDC1Q8WWB3 177 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 ATOH1Q92858 354 aaPredicted RBP6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 EXT2Q93063 718 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 INSM2Q96T92 566 aaPredicted RBP6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 ORAI3Q9BRQ5 295 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 LRFN3Q9BTN0 628 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 TRIM54Q9BYV2 358 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 ZDHHC5Q9C0B5 715 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 DERL2Q9GZP9 239 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 DPEP2Q9H4A9 486 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 CNOT10Q9H9A5 744 aaKnown RBP6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 SSU72Q9NP77 194 aaKnown RBP6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 GPR27Q9NS67 375 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 IMP3Q9NV31 184 aaKnown RBP6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 TRNAU1APQ9NX07 287 aaKnown RBP6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 MKS1Q9NXB0 559 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 NCDNQ9UBB6 729 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 XPR1Q9UBH6 696 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 DCDC2Q9UHG0 476 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 PILRBQ9UKJ0 227 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 ACSL5Q9ULC5 683 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 RNF112Q9ULX5 631 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 ASF1AQ9Y294 204 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 HCN4Q9Y3Q4 1203 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 HEBP2Q9Y5Z4 205 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 SLCO1B1Q9Y6L6 691 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 SCN8AQ9UQD0 1980 aa6.45□□□□□ -1.38
CTDNEP1-204ENST00000570484 TMEM120BA0PK00 339 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 CCDC189A1A4V9 331 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 HMX2A2RU54 273 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 B4DGG1 531 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 SUPT3HB4E1H0 165 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 KHNYNO15037 678 aaKnown RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 AQP9O43315 295 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 SGTAO43765 313 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 DFNA5O60443 496 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 KERAO60938 352 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 SDC3O75056 442 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 SMIM24O75264 130 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 SUPT3HO75486 399 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 KLHL2O95198 593 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 SYF2O95926 243 aaKnown RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 CSF2P04141 144 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 WNT1P04628 370 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 ANXA6P08133 673 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 ENO2P09104 434 aaPredicted RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 RBP1P09455 135 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 HIST1H2AGP0C0S8 130 aaPredicted RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 MPC1LP0DKB6 136 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 ALPPL2P10696 532 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 GFAPP14136 432 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 HIST1H2ADP20671 130 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 CRHR1P34998 444 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 CTSKP43235 329 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 PPM1FP49593 454 aaPredicted RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 CLCNKAP51800 687 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 PPP2R2AP63151 447 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 IRX4P78413 519 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 CTBSQ01459 385 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 ASPHQ12797 758 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 EIF2B5Q13144 721 aaKnown RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 ACAP2Q15057 778 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 OCLNQ16625 522 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 INAVAQ3KP66 663 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 ZNF542PQ5EBM4 170 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 ACSBG2Q5FVE4 666 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 PPM1JQ5JR12 505 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 N4BP2L1Q5TBK1 243 aaPredicted RBP6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 HHATQ5VTY9 493 aa6.44□□□□□ -1.38
CTDNEP1-204ENST00000570484 PEAR1Q5VY43 1037 aaPredicted RBP6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms