RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 TCAF1Q9Y4C2 921 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 SPTA1P02549 2419 aa13.28□□□□□ -0.28
VPS9D1-204ENST00000565023 HECTD1Q9ULT8 2610 aa13.27□□□□□ -0.28
VPS9D1-204ENST00000565023 C17orf113A0A1B0GUU1 675 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 GSAPA4D1B5 854 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 KLHL33A6NCF5 533 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 CCDC188H7C350 402 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 OR1I1O60431 355 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 EBLN1P0CF75 366 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 PRKAR1AP10644 381 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 TPSB2P20231 275 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 PSMA3P25788 255 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 NDUFS1P28331 727 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 NSG1P42857 185 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 C19orf57Q0VDD7 668 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 PRKAA1Q13131 559 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 TUBB3Q13509 450 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 SEMA3AQ14563 771 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 ITIH4Q14624 930 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 TPSAB1Q15661 275 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 SYTL3Q4VX76 610 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 FASTKD1Q53R41 847 aaKnown RBP13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 OTUD6BQ8N6M0 293 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 GALNT6Q8NCL4 622 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 OR4L1Q8NH43 312 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 LCN9Q8WX39 176 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 KLHL6Q8WZ60 621 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 KIAA1143Q96AT1 154 aaPredicted RBP13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 TRIM44Q96DX7 344 aaPredicted RBP13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 RANBP9Q96S59 729 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 ZPBPQ9BS86 351 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 OR52A5Q9H2C5 316 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 XKR8Q9H6D3 395 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 KIR3DX1Q9H7L2 352 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 CHRAC1Q9NRG0 131 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 SOHLH2Q9NX45 425 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 EPHA6Q9UF33 1036 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 ANAPC5Q9UJX4 755 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 HEBP2Q9Y5Z4 205 aa13.27□□□□□ -0.29
VPS9D1-204ENST00000565023 TOX3O15405 576 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 AP2A2O94973 939 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 TIAF1O95411 115 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 FTH1P02794 183 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 OR56A5P0C7T3 313 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 FOLR1P15328 257 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 NELFEP18615 380 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 CDH3P22223 829 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 MGAT1P26572 445 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 MAP4P27816 1152 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 PTGIRP43119 386 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 KPNA2P52292 529 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 LAMB3Q13751 1172 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 KCNJ11Q14654 390 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 PCID2Q5JVF3 399 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 C16orf46Q6P387 395 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 CES3Q6UWW8 571 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 ZNF534Q76KX8 674 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 ACVR1CQ8NER5 493 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 OR52E1Q8NGJ3 308 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 CPT1BQ92523 772 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 UBXN4Q92575 508 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 TFGQ92734 400 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 STAMBPL1Q96FJ0 436 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 C16orf45Q96MC5 204 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 RUNDC3BQ96NL0 473 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 TTC1Q99614 292 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 RAB33BQ9H082 229 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 KLHL25Q9H0H3 589 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 SRMSQ9H3Y6 488 aa13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 TDRKHQ9Y2W6 561 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 TMEM184BQ9Y519 407 aaPredicted RBP13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 MRPS18BQ9Y676 258 aaKnown RBP13.26□□□□□ -0.29
VPS9D1-204ENST00000565023 SPTBP11277 2137 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 TCRBV7S3A2A0A539 114 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 TLCD2A6NGC4 264 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 IQCF5A8MTL0 148 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 TK2O00142 265 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 AP3B1O00203 1094 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 SPAG6O75602 509 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 DLGAP3O95886 979 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 NMBRP28336 390 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 PPP1R7Q15435 360 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 GPR19Q15760 415 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 TBR1Q16650 682 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 LINC00303Q3SY05 128 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 C6orf15Q6UXA7 325 aaPredicted RBP13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 PPP1R3BQ86XI6 285 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 KLHL7Q8IXQ5 586 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 KRT222Q8N1A0 295 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 ZNF843Q8N446 348 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 ESX1Q8N693 406 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 LSM14AQ8ND56 463 aaKnown RBP13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 OR5AR1Q8NGP9 310 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 SLC12A9Q9BXP2 914 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 SPRY4Q9C004 299 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 PDE7BQ9NP56 450 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 CATSPERZQ9NTU4 200 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 SYBUQ9NX95 663 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 BFARQ9NZS9 450 aa13.25□□□□□ -0.29
VPS9D1-204ENST00000565023 MARCH4Q9P2E8 410 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms