RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 FBXO15Q8NCQ5 510 aaPredicted RBP15.23■□□□□ 0.03
COMMD4-210ENST00000564587 OR14C36Q8NHC7 312 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 NAT14Q8WUY8 206 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 TWIST2Q8WVJ9 160 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 ATP6V1E2Q96A05 226 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 C19orf60Q96EN9 201 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 NSUN5Q96P11 429 aaKnown RBP15.23■□□□□ 0.03
COMMD4-210ENST00000564587 TEX101Q9BY14 249 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 DPEP2Q9H4A9 486 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 SLC32A1Q9H598 525 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 RMI1Q9H9A7 625 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 ZBTB26Q9HCK0 441 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 CD248Q9HCU0 757 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 ARMCX1Q9P291 453 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 ATXN10Q9UBB4 475 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 TSR3Q9UJK0 312 aaKnown RBP15.23■□□□□ 0.03
COMMD4-210ENST00000564587 MMP17Q9ULZ9 603 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 FIS1Q9Y3D6 152 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 ANKRD12Q6UB98 2062 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 F5P12259 2224 aa15.23■□□□□ 0.03
COMMD4-210ENST00000564587 PRR5-ARHGAP8B1AHC4 643 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 H3BM21 787 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 K7ESM1 405 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 CHUKO15111 745 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 TAPBPO15533 448 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 KCNJ13O60928 360 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 RNGTTO60942 597 aaKnown RBP15.22■□□□□ 0.03
COMMD4-210ENST00000564587 LILRB5O75023 590 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 SKAP2O75563 359 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-210ENST00000564587 PCCBP05166 539 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 THRAP10827 490 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 TSPAN8P19075 237 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 TRIM23P36406 574 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 HSPA7P48741 367 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 ATP4BP51164 291 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 CCNG1P51959 295 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 ARHGAP8P85298 464 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 CCINQ13939 588 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 UBAP2LQ14157 1087 aaKnown RBP15.22■□□□□ 0.03
COMMD4-210ENST00000564587 HERC3Q15034 1050 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 CCDC85BQ15834 202 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-210ENST00000564587 TMEM259Q4ZIN3 620 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 RNF165Q6ZSG1 346 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 CHSY3Q70JA7 882 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 LRRTM4Q86VH4 590 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 HEATR4Q86WZ0 1026 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 ARHGAP24Q8N264 748 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 TEX9Q8N6V9 391 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 BEND7Q8N7W2 519 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-210ENST00000564587 OR2L2Q8NH16 312 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 MAGEC3Q8TD91 643 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 DLG3Q92796 817 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 FBXL8Q96CD0 374 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 SLC7A6OSQ96CW6 309 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-210ENST00000564587 CCDC138Q96M89 665 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 BTBD10Q9BSF8 475 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 NTMT1Q9BV86 223 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 SLC17A9Q9BYT1 436 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 C1orf21Q9H246 121 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 WDR26Q9H7D7 661 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 NOL11Q9H8H0 719 aaKnown RBP15.22■□□□□ 0.03
COMMD4-210ENST00000564587 RIC8BQ9NVN3 520 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 SERGEFQ9UGK8 458 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 MBD1Q9UIS9 605 aaPredicted RBP15.22■□□□□ 0.03
COMMD4-210ENST00000564587 DNAJC15Q9Y5T4 150 aa15.22■□□□□ 0.03
COMMD4-210ENST00000564587 A0A1W2PQU0 124 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 UBDO15205 165 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 GYG2O15488 501 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 DCXO43602 365 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 CCNT2O60583 730 aaKnown RBP15.21■□□□□ 0.03
COMMD4-210ENST00000564587 POP7O75817 140 aaKnown RBP15.21■□□□□ 0.03
COMMD4-210ENST00000564587 WDR47O94967 919 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 HOXC4P09017 264 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-210ENST00000564587 EBLN1P0CF75 366 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 ZNF8P17098 575 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-210ENST00000564587 ADPRHP54922 357 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 PRKCQQ04759 706 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 KLF10Q13118 480 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 SQLEQ14534 574 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 MAPRE2Q15555 327 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 DNAL1Q4LDG9 190 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 ZNF658BQ4V348 819 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-210ENST00000564587 CLEC6AQ6EIG7 209 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 ZNF852Q6ZMS4 543 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 LARP4Q71RC2 724 aaKnown RBP eCLIP15.21■□□□□ 0.03
COMMD4-210ENST00000564587 MILR1Q7Z6M3 343 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 SYVN1Q86TM6 617 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 CACUL1Q86Y37 369 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 TREML1Q86YW5 311 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 VRK3Q8IV63 474 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 PELI3Q8N2H9 469 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 TP53I13Q8NBR0 393 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-210ENST00000564587 DENND6BQ8NEG7 585 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 RPLP0P6Q8NHW5 317 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 RP9Q8TA86 221 aaKnown RBP15.21■□□□□ 0.03
COMMD4-210ENST00000564587 PRR11Q96HE9 360 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-210ENST00000564587 LENG8Q96PV6 779 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-210ENST00000564587 TMEM79Q9BSE2 394 aa15.21■□□□□ 0.03
COMMD4-210ENST00000564587 MMADHCQ9H3L0 296 aaPredicted RBP15.21■□□□□ 0.03
COMMD4-210ENST00000564587 IPPKQ9H8X2 491 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms