RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 CXADRP78310 365 aa27.53■■■□□ 2
NME3-203ENST00000563367 SH3BP2P78314 561 aa27.53■■■□□ 2
NME3-203ENST00000563367 PRKG2Q13237 762 aa27.53■■■□□ 2
NME3-203ENST00000563367 SRSF6Q13247 344 aaKnown RBP27.53■■■□□ 2
NME3-203ENST00000563367 ANKRD20A4Q4UJ75 823 aa27.53■■■□□ 2
NME3-203ENST00000563367 SYTL3Q4VX76 610 aa27.53■■■□□ 2
NME3-203ENST00000563367 OOSP2Q86WS3 158 aa27.53■■■□□ 2
NME3-203ENST00000563367 OTUD6BQ8N6M0 293 aa27.53■■■□□ 2
NME3-203ENST00000563367 SIGLEC10Q96LC7 697 aa27.53■■■□□ 2
NME3-203ENST00000563367 MVB12BQ9H7P6 319 aa27.53■■■□□ 2
NME3-203ENST00000563367 WDR70Q9NW82 654 aa27.53■■■□□ 2
NME3-203ENST00000563367 IL1RAPL1Q9NZN1 696 aa27.53■■■□□ 2
NME3-203ENST00000563367 SAMD15Q9P1V8 674 aa27.53■■■□□ 2
NME3-203ENST00000563367 SEMA5BQ9P283 1151 aa27.53■■■□□ 2
NME3-203ENST00000563367 IGHV5-51A0A0C4DH38 117 aa27.52■■■□□ 2
NME3-203ENST00000563367 F8W8V4 182 aa27.52■■■□□ 2
NME3-203ENST00000563367 DNALI1O14645 258 aaPredicted RBP27.52■■■□□ 2
NME3-203ENST00000563367 NDUFS3O75489 264 aa27.52■■■□□ 2
NME3-203ENST00000563367 TMPRSS3P57727 454 aa27.52■■■□□ 2
NME3-203ENST00000563367 VRK3Q8IV63 474 aa27.52■■■□□ 2
NME3-203ENST00000563367 OR5AR1Q8NGP9 310 aa27.52■■■□□ 2
NME3-203ENST00000563367 LCN9Q8WX39 176 aa27.52■■■□□ 2
NME3-203ENST00000563367 ZNF669Q96BR6 464 aaPredicted RBP27.52■■■□□ 2
NME3-203ENST00000563367 MAP3K3Q99759 626 aa27.52■■■□□ 2
NME3-203ENST00000563367 HGH1Q9BTY7 390 aa27.52■■■□□ 2
NME3-203ENST00000563367 ASPSCR1Q9BZE9 553 aa27.52■■■□□ 2
NME3-203ENST00000563367 CDYLQ9Y232 598 aa27.52■■■□□ 2
NME3-203ENST00000563367 MAGEB16A2A368 324 aa27.51■■□□□ 1.99
NME3-203ENST00000563367 IVDP26440 423 aa27.51■■□□□ 1.99
NME3-203ENST00000563367 DHX34Q14147 1143 aaKnown RBP27.51■■□□□ 1.99
NME3-203ENST00000563367 TYSND1Q2T9J0 566 aa27.51■■□□□ 1.99
NME3-203ENST00000563367 DNTTIP2Q5QJE6 756 aaKnown RBP27.51■■□□□ 1.99
NME3-203ENST00000563367 PTRHD1Q6GMV3 140 aaKnown RBP27.51■■□□□ 1.99
NME3-203ENST00000563367 MRNIPQ6NTE8 343 aa27.51■■□□□ 1.99
NME3-203ENST00000563367 TMEM135Q86UB9 458 aa27.51■■□□□ 1.99
NME3-203ENST00000563367 OR52E1Q8NGJ3 308 aa27.51■■□□□ 1.99
NME3-203ENST00000563367 TFB2MQ9H5Q4 396 aaKnown RBP27.51■■□□□ 1.99
NME3-203ENST00000563367 LOC400499M0QZD8 3231 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 ZCWPW2A0A1B0GU75 182 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 STMND1H3BQB6 276 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 EFSO43281 561 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 GPC4O75487 556 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 POLR2CP19387 275 aaPredicted RBP27.5■■□□□ 1.99
NME3-203ENST00000563367 RPS3P23396 243 aaKnown RBP eCLIP27.5■■□□□ 1.99
NME3-203ENST00000563367 AOAHP28039 575 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 KPNA2P52292 529 aaKnown RBP27.5■■□□□ 1.99
NME3-203ENST00000563367 UCNP55089 124 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 PLOD1Q02809 727 aaPredicted RBP27.5■■□□□ 1.99
NME3-203ENST00000563367 FOXM1Q08050 763 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 HSPA14Q0VDF9 509 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 CEACAM20Q6UY09 585 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 SDCCAG8Q86SQ7 713 aaPredicted RBP27.5■■□□□ 1.99
NME3-203ENST00000563367 LPGAT1Q92604 370 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 PPM1MQ96MI6 270 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 TSSK1BQ9BXA7 367 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 SPRY4Q9C004 299 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 SRMSQ9H3Y6 488 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 XKR8Q9H6D3 395 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 GNPTGQ9UJJ9 305 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 ASF1AQ9Y294 204 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 RPS6KL1Q9Y6S9 549 aa27.5■■□□□ 1.99
NME3-203ENST00000563367 SNRNP200O75643 2136 aaKnown RBP27.49■■□□□ 1.99
NME3-203ENST00000563367 UBA6A0AVT1 1052 aaPredicted RBP27.49■■□□□ 1.99
NME3-203ENST00000563367 BTN3A3O00478 584 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 POLR1CO15160 346 aaPredicted RBP27.49■■□□□ 1.99
NME3-203ENST00000563367 NELFEP18615 380 aaKnown RBP27.49■■□□□ 1.99
NME3-203ENST00000563367 PAMP19021 973 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 PAFAH1B1P43034 410 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 EIF3BP55884 814 aaKnown RBP27.49■■□□□ 1.99
NME3-203ENST00000563367 CTSL3PQ5NE16 218 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 IZUMO3Q5VZ72 239 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 NEPROQ6NW34 567 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 ARMC6Q6NXE6 501 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 VASH2Q86V25 355 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 LRRC6Q86X45 466 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 SLC22A15Q8IZD6 547 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 UBXN4Q92575 508 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 SLC41A2Q96JW4 573 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 BIRC8Q96P09 236 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 TEFMQ96QE5 360 aaKnown RBP27.49■■□□□ 1.99
NME3-203ENST00000563367 OR6C1Q96RD1 312 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 CCNL2Q96S94 520 aaPredicted RBP27.49■■□□□ 1.99
NME3-203ENST00000563367 CD180Q99467 661 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 MAD1L1Q9Y6D9 718 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 IGSF10Q6WRI0 2623 aa27.49■■□□□ 1.99
NME3-203ENST00000563367 TLCD2A6NGC4 264 aa27.48■■□□□ 1.99
NME3-203ENST00000563367 BTN3A1O00481 513 aa27.48■■□□□ 1.99
NME3-203ENST00000563367 TPBGLP0DKB5 382 aa27.48■■□□□ 1.99
NME3-203ENST00000563367 OGNP20774 298 aaKnown RBP27.48■■□□□ 1.99
NME3-203ENST00000563367 DR1Q01658 176 aa27.48■■□□□ 1.99
NME3-203ENST00000563367 KCNAB1Q14722 419 aa27.48■■□□□ 1.99
NME3-203ENST00000563367 ARHGAP40Q5TG30 622 aa27.48■■□□□ 1.99
NME3-203ENST00000563367 FBXO38Q6PIJ6 1188 aa27.48■■□□□ 1.99
NME3-203ENST00000563367 CENPUQ71F23 418 aa27.48■■□□□ 1.99
NME3-203ENST00000563367 CILP2Q8IUL8 1156 aa27.48■■□□□ 1.99
NME3-203ENST00000563367 ASZ1Q8WWH4 475 aa27.48■■□□□ 1.99
NME3-203ENST00000563367 NKD1Q969G9 470 aa27.48■■□□□ 1.99
NME3-203ENST00000563367 TCF12Q99081 682 aa27.48■■□□□ 1.99
NME3-203ENST00000563367 ICKQ9UPZ9 632 aa27.48■■□□□ 1.99
NME3-203ENST00000563367 CRYL1Q9Y2S2 319 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms