RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 CD1EP15812 388 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 TEAD1P28347 426 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 SLC25A3Q00325 362 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 MAPRE2Q15555 327 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 SYTL3Q4VX76 610 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 TMEM196Q5HYL7 178 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 LRRC70Q7Z2Q7 622 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 SLC22A15Q8IZD6 547 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 CDYL2Q8N8U2 506 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 OR4F6Q8NGB9 312 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 MCOLN3Q8TDD5 553 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 SLC32A1Q9H598 525 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 DENND2DQ9H6A0 471 aaPredicted RBP12.63□□□□□ -0.39
SNX1-211ENST00000560829 C8orf33Q9H7E9 229 aaPredicted RBP12.63□□□□□ -0.39
SNX1-211ENST00000560829 GULP1Q9UBP9 304 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 BTRCQ9Y297 605 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 PTGDR2Q9Y5Y4 395 aa12.63□□□□□ -0.39
SNX1-211ENST00000560829 GRXCR2A6NFK2 248 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 PSMD12O00232 456 aaPredicted RBP12.62□□□□□ -0.39
SNX1-211ENST00000560829 LIN7AO14910 233 aaPredicted RBP12.62□□□□□ -0.39
SNX1-211ENST00000560829 KATNA1O75449 491 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 CAPN1P07384 714 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 LINC00032P0C843 101 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 EBLN1P0CF75 366 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 EPB42P16452 691 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 ITGAXP20702 1163 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 GDF5P43026 501 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 CCR3P51677 355 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 SEC13P55735 322 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 CUL3Q13618 768 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 SNCBQ16143 134 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 ZXDCQ2QGD7 858 aaPredicted RBP12.62□□□□□ -0.39
SNX1-211ENST00000560829 KIAA1211LQ6NV74 962 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.62□□□□□ -0.39
SNX1-211ENST00000560829 MBOAT1Q6ZNC8 495 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 SPATA19Q7Z5L4 167 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 MILR1Q7Z6M3 343 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 ULK2Q8IYT8 1036 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 HDDC3Q8N4P3 179 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 IL17RCQ8NAC3 791 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 METTL6Q8TCB7 284 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 SKA2Q8WVK7 121 aaPredicted RBP12.62□□□□□ -0.39
SNX1-211ENST00000560829 DNASE1L2Q92874 299 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 FBXL8Q96CD0 374 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 TUBGCP3Q96CW5 907 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 CDK15Q96Q40 435 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 CD248Q9HCU0 757 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 ATXN10Q9UBB4 475 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 SERGEFQ9UGK8 458 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 TRPS1Q9UHF7 1281 aa12.62□□□□□ -0.39
SNX1-211ENST00000560829 A0A088AWK7 358 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 PABPN1LA6NDY0 278 aaKnown RBP12.61□□□□□ -0.39
SNX1-211ENST00000560829 C2CD4DB7Z1M9 353 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 EGFP01133 1207 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 DRD1P21728 446 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 GPX3P22352 226 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 CCNG1P51959 295 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 PLOD1Q02809 727 aaPredicted RBP12.61□□□□□ -0.39
SNX1-211ENST00000560829 GRIK2Q13002 908 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 GTF2H3Q13889 308 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 GRB7Q14451 532 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 STARD3Q14849 445 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 GSTA3Q16772 222 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 SDE2Q6IQ49 451 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 PNCKQ6P2M8 343 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 PGM2L1Q6PCE3 622 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 TRMT11Q7Z4G4 463 aaKnown RBP12.61□□□□□ -0.39
SNX1-211ENST00000560829 TRIM74Q86UV6 250 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 ZNF547Q8IVP9 402 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 SCUBE1Q8IWY4 988 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 KLHDC8AQ8IYD2 350 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 PLA2G15Q8NCC3 412 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 FBXO15Q8NCQ5 510 aaPredicted RBP12.61□□□□□ -0.39
SNX1-211ENST00000560829 ATP6V1E2Q96A05 226 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 HIC2Q96JB3 615 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 THTPAQ9BU02 230 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 MKRN2Q9H000 416 aaKnown RBP12.61□□□□□ -0.39
SNX1-211ENST00000560829 OR2AG1Q9H205 316 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 RIC8BQ9NVN3 520 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 BAIAP2L1Q9UHR4 511 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 ANGPTL3Q9Y5C1 460 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 PIAS3Q9Y6X2 628 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.61□□□□□ -0.39
SNX1-211ENST00000560829 A0A1W2PP55 124 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 A0A1W2PQF6 199 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 IGLON5A6NGN9 336 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 H3BQ06 376 aaPredicted RBP12.61□□□□□ -0.39
SNX1-211ENST00000560829 ADAM23O75077 832 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 WDR47O94967 919 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 HGFP14210 728 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 EPORP19235 508 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 STX1BP61266 288 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 STX5Q13190 355 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 FASTKQ14296 549 aaKnown RBP12.61□□□□□ -0.39
SNX1-211ENST00000560829 ZRSR2Q15696 482 aaKnown RBP12.61□□□□□ -0.39
SNX1-211ENST00000560829 WSCD2Q2TBF2 565 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 XKR5Q6UX68 686 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 Q6ZSR9 355 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 SLC44A3Q8N4M1 653 aa12.61□□□□□ -0.39
SNX1-211ENST00000560829 KYQ8NBH2 561 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms