RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 BRF2Q9HAW0 419 aa13.66□□□□□ -0.22
CSPG4P12-202ENST00000559989 MYH9P35579 1960 aaKnown RBP13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 ELOA3DA6NLF2 546 aaPredicted RBP13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 ZNF670-ZNF695F2Z2N8 137 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 H0YGN5 161 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 EPHB6O15197 1021 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 ADH1CP00326 375 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 IL1R1P14778 569 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 GRIK4Q16099 956 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 ELOA3BQ3SY89 546 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 ARSHQ5FYA8 562 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 MED27Q6P2C8 311 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 SLC27A1Q6PCB7 646 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 ELOA3Q8NG57 546 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 EXOSC8Q96B26 276 aaKnown RBP13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 RIPOR3Q96MK2 946 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 TSTD3H0UI37 97 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 SLC20A2Q08357 652 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 DSG2Q14126 1118 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 CNTD1Q8N815 330 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 GMCL1P1Q8NEA9 526 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 FCAMRQ8WWV6 532 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 NCSTNQ92542 709 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 FDXACB1Q9BRP7 624 aaPredicted RBP13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 ASB7Q9H672 318 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 SHBGP04278 402 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 TCEA1P23193 301 aaKnown RBP13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 ADH6P28332 368 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 XKP51811 444 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 CDH12P55289 794 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 ERVK-9P63128 1117 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 TARDBPQ13148 414 aaKnown RBP eCLIP13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 UAP1L1Q3KQV9 507 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 RBM18Q96H35 190 aaKnown RBP13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 LMLNQ96KR4 655 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 FBXL3Q9UKT7 428 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 TPST2O60704 377 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 IFNGR1P15260 489 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 SGCBQ16585 318 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 IFI44LQ53G44 452 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 KRBOX4Q5JUW0 171 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 CDC42EP5Q6NZY7 148 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 FAM151AQ8WW52 585 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 ROPN1LQ96C74 230 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 MSANTD3Q96H12 275 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 OR14A2Q96R54 314 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 PCBD2Q9H0N5 130 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 MYNNQ9NPC7 610 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 A0A1B0GVM2 712 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 TCAF2A6NFQ2 919 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 NR2C1P13056 603 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 CSTF2P33240 577 aaKnown RBP eCLIP13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 CRHR1P34998 444 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 NKX6-1P78426 367 aaPredicted RBP13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 NRG1Q02297 640 aaPredicted RBP13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 ABRAXAS2Q15018 415 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 POGLUT1Q8NBL1 392 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 TMEM39AQ9NV64 488 aa13.65□□□□□ -0.22
CSPG4P12-202ENST00000559989 CAPN8A6NHC0 703 aa13.65□□□□□ -0.23
CSPG4P12-202ENST00000559989 LIASO43766 372 aa13.65□□□□□ -0.23
CSPG4P12-202ENST00000559989 CD36P16671 472 aa13.65□□□□□ -0.23
CSPG4P12-202ENST00000559989 GNRHRP30968 328 aa13.65□□□□□ -0.23
CSPG4P12-202ENST00000559989 PSEN2P49810 448 aa13.65□□□□□ -0.23
CSPG4P12-202ENST00000559989 PRKD1Q15139 912 aaPredicted RBP13.65□□□□□ -0.23
CSPG4P12-202ENST00000559989 ERI1Q8IV48 349 aaKnown RBP13.65□□□□□ -0.23
CSPG4P12-202ENST00000559989 ARHGAP12Q8IWW6 846 aa13.65□□□□□ -0.23
CSPG4P12-202ENST00000559989 YIPF7Q8N8F6 280 aa13.65□□□□□ -0.23
CSPG4P12-202ENST00000559989 FGF19O95750 216 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 DRD4P21917 467 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 GSTM2P28161 218 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 SREBF1P36956 1147 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 CLCN4P51793 760 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 NFE2L1Q14494 772 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 DCST2Q5T1A1 773 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 NPNTQ6UXI9 565 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 SV2AQ7L0J3 742 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 C4orf19Q8IY42 314 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 NRSN1Q8IZ57 195 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF611Q8N823 705 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 TWIST2Q8WVJ9 160 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 MIOSQ9NXC5 875 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 ATP6AP2O75787 350 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 GCNT1Q02742 428 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 HEPACAMQ14CZ8 416 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 MSANTD2Q6P1R3 559 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 AZIN2Q96A70 460 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 MYOZ2Q9NPC6 264 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF282Q9UDV7 671 aaPredicted RBP13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 ITPKAP23677 461 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 ABCG1P45844 678 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 FAM129CQ86XR2 697 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 KCNS2Q9ULS6 477 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 LACTBL1A8MY62 500 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 E5RJQ4 531 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 TGM6O95932 706 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 VIPP01282 170 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 SH3D19Q5HYK7 790 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 VTCN1Q7Z7D3 282 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 ATAD1Q8NBU5 361 aa13.64□□□□□ -0.23
CSPG4P12-202ENST00000559989 DNERQ8NFT8 737 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms