RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 PDK4Q16654 411 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 SBSNQ6UWP8 590 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 UNC5DQ6UXZ4 953 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 RABEPKQ7Z6M1 372 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 RAB44Q7Z6P3 723 aaPredicted RBP16.49■□□□□ 0.23
SNX1-203ENST00000558040 C10orf107Q8IVU9 208 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 MCOLN3Q8TDD5 553 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 LRRC8CQ8TDW0 803 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 HIST1H2AHQ96KK5 128 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 MAGEB18Q96M61 343 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 HIST1H2AJQ99878 128 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 H2AFJQ9BTM1 129 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 MECRQ9BV79 373 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 SLC12A9Q9BXP2 914 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 GSDMCQ9BYG8 508 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 PARVBQ9HBI1 364 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 DNAJC28Q9NX36 388 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 CD274Q9NZQ7 290 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 ADAM21Q9UKJ8 722 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 ADAMTS6Q9UKP5 1117 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 THADAQ6YHU6 1953 aa16.49■□□□□ 0.23
SNX1-203ENST00000558040 KMT2EQ8IZD2 1858 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 PRR19A6NJB7 356 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 UBXN8O00124 270 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 GALR2O43603 387 aaPredicted RBP16.48■□□□□ 0.23
SNX1-203ENST00000558040 DLX3O60479 287 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 TRIM13O60858 407 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 IPO13O94829 963 aaKnown RBP16.48■□□□□ 0.23
SNX1-203ENST00000558040 HOXD12P35452 270 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 CSNK1EP49674 416 aaKnown RBP16.48■□□□□ 0.23
SNX1-203ENST00000558040 AP1S2P56377 157 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 CDKL1Q00532 357 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 NFKB2Q00653 900 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 CTBSQ01459 385 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 SIM2Q14190 667 aaPredicted RBP16.48■□□□□ 0.23
SNX1-203ENST00000558040 PPP1R3AQ16821 1122 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 CDKL4Q5MAI5 379 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 LIPMQ5VYY2 423 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 LAYNQ6UX15 382 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 XKR5Q6UX68 686 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 FBXO39Q8N4B4 442 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 CFAP61Q8NHU2 1237 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 MAGEC3Q8TD91 643 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 WWP1Q9H0M0 922 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 TMEM168Q9H0V1 697 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 CCDC134Q9H6E4 229 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 OXSMQ9NWU1 459 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 UTP6Q9NYH9 597 aaKnown RBP16.48■□□□□ 0.23
SNX1-203ENST00000558040 SIRPGQ9P1W8 387 aa16.48■□□□□ 0.23
SNX1-203ENST00000558040 APOBEC3BQ9UH17 382 aaKnown RBP16.48■□□□□ 0.23
SNX1-203ENST00000558040 ATXN2Q99700 1313 aaKnown RBP16.47■□□□□ 0.23
SNX1-203ENST00000558040 LRP4O75096 1905 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 A8MT66 165 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 PDZK1P1A8MUH7 402 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 SCAMP1O15126 338 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 FFAR2O15552 330 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 CSF2P04141 144 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 NME1P15531 152 aaKnown RBP16.47■□□□□ 0.23
SNX1-203ENST00000558040 JUNDP17535 347 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 ACADLP28330 430 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 ACTR1BP42025 376 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 HALP42357 657 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 KCNC1P48547 511 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 RPIAP49247 311 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 ALDH18A1P54886 795 aaKnown RBP16.47■□□□□ 0.23
SNX1-203ENST00000558040 DNAJB13P59910 316 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 ACTR1AP61163 376 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 GNGT1P63211 74 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 CHI3L2Q15782 390 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 ATG16L1Q676U5 607 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 TTC19Q6DKK2 380 aaPredicted RBP16.47■□□□□ 0.23
SNX1-203ENST00000558040 TTC23LQ6PF05 361 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 WASH2PQ6VEQ5 465 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 SPATS2Q86XZ4 545 aaKnown RBP16.47■□□□□ 0.23
SNX1-203ENST00000558040 SYT12Q8IV01 421 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 RASGRP3Q8IV61 690 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 ABCA7Q8IZY2 2146 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 PDPRQ8NCN5 879 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 FBXO15Q8NCQ5 510 aaPredicted RBP16.47■□□□□ 0.23
SNX1-203ENST00000558040 GPBAR1Q8TDU6 330 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 TFGQ92734 400 aaPredicted RBP16.47■□□□□ 0.23
SNX1-203ENST00000558040 EGFL8Q99944 293 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 MANSC1Q9H8J5 431 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 C11orf16Q9NQ32 467 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 WASH6PQ9NQA3 447 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 PILRBQ9UKJ0 227 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 PNMA8BQ9ULN7 279 aaPredicted RBP16.47■□□□□ 0.23
SNX1-203ENST00000558040 PSMD13Q9UNM6 376 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 PDE10AQ9Y233 779 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 ASF1AQ9Y294 204 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 PLEKHM1Q9Y4G2 1056 aa16.47■□□□□ 0.23
SNX1-203ENST00000558040 NCF1BA6NI72 391 aaPredicted RBP16.46■□□□□ 0.23
SNX1-203ENST00000558040 NCF1CA8MVU1 366 aaPredicted RBP16.46■□□□□ 0.23
SNX1-203ENST00000558040 STX16-NPEPL1H3BU86 382 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 STX16O14662 325 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 KLK8O60259 260 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 SERPINE1P05121 402 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 ANXA5P08758 320 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 MTHFD2P13995 350 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 NCF1P14598 390 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms