RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 CD320Q9NPF0 282 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 LATS2Q9NRM7 1088 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 ZNF639Q9UID6 485 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 MAGEL2Q9UJ55 1249 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 PTBP2Q9UKA9 531 aaKnown RBP17.38■□□□□ 0.37
XRCC3-218ENST00000557439 ARVCFO00192 962 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 OTCP00480 354 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 MATN1P21941 496 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 ILF2Q12905 390 aaKnown RBP17.38■□□□□ 0.37
XRCC3-218ENST00000557439 C16orf72Q14CZ0 275 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 CHRNA6Q15825 494 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 IMPG1Q17R60 797 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 ADNPQ9H2P0 1102 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 ZFYVE1Q9HBF4 777 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 TUBA8Q9NY65 449 aaPredicted RBP17.38■□□□□ 0.37
XRCC3-218ENST00000557439 ADGRE2Q9UHX3 823 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 MBD1Q9UIS9 605 aaPredicted RBP17.38■□□□□ 0.37
XRCC3-218ENST00000557439 ZNF490Q9ULM2 529 aaPredicted RBP17.38■□□□□ 0.37
XRCC3-218ENST00000557439 U3KQV3 271 aa17.38■□□□□ 0.37
XRCC3-218ENST00000557439 GSTA4O15217 222 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 PFDN1O60925 122 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 SEC22BO75396 215 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 PGLSO95336 258 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 NR4A1P22736 598 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 PIGAP37287 484 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 FXNQ16595 210 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 CPSF6Q16630 551 aaKnown RBP eCLIP17.37■□□□□ 0.37
XRCC3-218ENST00000557439 TXNDC8Q6A555 127 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 KIAA1841Q6NSI8 718 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 GCNT7Q6ZNI0 430 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 NPAS4Q8IUM7 802 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 RGL4Q8IZJ4 473 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 ARL14EPQ8N8R7 260 aaPredicted RBP17.37■□□□□ 0.37
XRCC3-218ENST00000557439 SNRNP27Q8WVK2 155 aaKnown RBP17.37■□□□□ 0.37
XRCC3-218ENST00000557439 TOR3AQ9H497 397 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 CWH43Q9H720 699 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 FANCEQ9HB96 536 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 PFDN4Q9NQP4 134 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 PKD2L2Q9NZM6 624 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 ANAPC1Q9H1A4 1944 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 AREL1O15033 823 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 KCNH1O95259 989 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 ALPLP05186 524 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 BPIP17213 487 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 HNF1BP35680 557 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 NEK2P51955 445 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 CHRNB3Q05901 458 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 CYP4F3Q08477 520 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 NFATC2Q13469 925 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 CDH18Q13634 790 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 DAG1Q14118 895 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 ARHGEF7Q14155 803 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 SLC8B1Q6J4K2 584 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 TMEM179BQ7Z7N9 219 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 ALDH16A1Q8IZ83 802 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 ADAMTS16Q8TE57 1224 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 ITCHQ96J02 903 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 OPTCQ9UBM4 332 aa17.37■□□□□ 0.37
XRCC3-218ENST00000557439 FAF1Q9UNN5 650 aaPredicted RBP17.37■□□□□ 0.37
XRCC3-218ENST00000557439 TDRKHQ9Y2W6 561 aaKnown RBP17.37■□□□□ 0.37
XRCC3-218ENST00000557439 UPK3BL1B0FP48 263 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 UPK3BL2E5RIL1 263 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 PRKD3O94806 890 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 ZNF7P17097 686 aaPredicted RBP17.36■□□□□ 0.37
XRCC3-218ENST00000557439 CCL23P55773 120 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 PHC1P78364 1004 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 BNIP3Q12983 259 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 LAPTM4AQ15012 233 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 MAPKAPK3Q16644 382 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 RNF175Q8N4F7 328 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 PDPRQ8NCN5 879 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 PDZD8Q8NEN9 1154 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 GFM2Q969S9 779 aaKnown RBP17.36■□□□□ 0.37
XRCC3-218ENST00000557439 CDK5RAP1Q96SZ6 601 aaKnown RBP17.36■□□□□ 0.37
XRCC3-218ENST00000557439 FAM126AQ9BYI3 521 aaPredicted RBP17.36■□□□□ 0.37
XRCC3-218ENST00000557439 DPY30Q9C005 99 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 ING2Q9H160 280 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 COMMD8Q9NX08 183 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 MTRRQ9UBK8 725 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 TNPO3Q9Y5L0 923 aaKnown RBP17.36■□□□□ 0.37
XRCC3-218ENST00000557439 OR51B4Q9Y5P0 310 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 ARNTLO00327 626 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 DEAF1O75398 565 aaPredicted RBP17.36■□□□□ 0.37
XRCC3-218ENST00000557439 RAP2AP10114 183 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 THRBP10828 461 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 CD9P21926 228 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 JAK1P23458 1154 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 TM4SF4P48230 202 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 TUFMP49411 452 aaKnown RBP17.36■□□□□ 0.37
XRCC3-218ENST00000557439 ALDH3A2P51648 485 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 CRY1Q16526 586 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 TBC1D25Q3MII6 688 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 FAM98BQ52LJ0 330 aaKnown RBP17.36■□□□□ 0.37
XRCC3-218ENST00000557439 STK40Q8N2I9 435 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 ZNF548Q8NEK5 533 aaPredicted RBP17.36■□□□□ 0.37
XRCC3-218ENST00000557439 ADAMTS19Q8TE59 1207 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 RHBDF1Q96CC6 855 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 HIPK3Q9H422 1215 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 HPS4Q9NQG7 708 aa17.36■□□□□ 0.37
XRCC3-218ENST00000557439 CRLS1Q9UJA2 301 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms