RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 BHMG1C9JSJ3 638 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-209ENST00000557342 MATN2O00339 956 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 NVLO15381 856 aaKnown RBP12.16□□□□□ -0.46
SLIRP-209ENST00000557342 GPC4O75487 556 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 RASSF9O75901 435 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 URI1O94763 535 aaPredicted RBP12.16□□□□□ -0.46
SLIRP-209ENST00000557342 RPN2P04844 631 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 ITIH1P19827 911 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 AOAHP28039 575 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 ACADLP28330 430 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 FMO4P31512 558 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 TSPAN7P41732 249 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 RPL21P46778 160 aaKnown RBP12.16□□□□□ -0.46
SLIRP-209ENST00000557342 GFERP55789 205 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 RAB15P59190 212 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 HSPA14Q0VDF9 509 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 PRKAA1Q13131 559 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 CALCOCO2Q13137 446 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 TUBB2AQ13885 445 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 CRYMQ14894 314 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 WHAMMP3Q1A5X7 153 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 IRGCQ6NXR0 463 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 CENPUQ71F23 418 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 OTOAQ7RTW8 1153 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 PRSS42Q7Z5A4 293 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 KCNMB4Q86W47 210 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 FAM129CQ86XR2 697 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 TBC1D21Q8IYX1 336 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 SLC22A15Q8IZD6 547 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 KRT222Q8N1A0 295 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 LCN9Q8WX39 176 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 USP7Q93009 1102 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 DCBLD2Q96PD2 775 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 TAAR9Q96RI9 348 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 TUBB2BQ9BVA1 445 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 RAB17Q9H0T7 212 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 CCDC68Q9H2F9 335 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 TRIT1Q9H3H1 467 aaKnown RBP12.16□□□□□ -0.46
SLIRP-209ENST00000557342 SRMSQ9H3Y6 488 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 TFB2MQ9H5Q4 396 aaKnown RBP12.16□□□□□ -0.46
SLIRP-209ENST00000557342 HRASLS2Q9NWW9 162 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 IL1RAPL1Q9NZN1 696 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 WHRNQ9P202 907 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 CRYL1Q9Y2S2 319 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 SNX24Q9Y343 169 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 UTP11Q9Y3A2 253 aaKnown RBP12.16□□□□□ -0.46
SLIRP-209ENST00000557342 MRFAP1Q9Y605 127 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 COMMD10Q9Y6G5 202 aa12.16□□□□□ -0.46
SLIRP-209ENST00000557342 OR6C74A6NCV1 312 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 EFCAB7A8K855 629 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 ESPNB1AK53 854 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 E5RI56 91 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 AGRPO00253 132 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 RAD51CO43502 376 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 SLCO2B1O94956 709 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 S1PR4O95977 384 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 FGF3P11487 239 aaPredicted RBP12.15□□□□□ -0.46
SLIRP-209ENST00000557342 CCL4P13236 92 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 PKMP14618 531 aaKnown RBP12.15□□□□□ -0.46
SLIRP-209ENST00000557342 CHRM3P20309 590 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 CD82P27701 267 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 SLC5A2P31639 672 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 ETV5P41161 510 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 CSE1LP55060 971 aaKnown RBP12.15□□□□□ -0.46
SLIRP-209ENST00000557342 MC2RQ01718 297 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 MSS51Q4VC12 460 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 HSP90AA5PQ58FG0 334 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 CTSL3PQ5NE16 218 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 DNTTIP2Q5QJE6 756 aaKnown RBP12.15□□□□□ -0.46
SLIRP-209ENST00000557342 PLEKHS1Q5SXH7 462 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 CACHD1Q5VU97 1274 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 CYB5D1Q6P9G0 228 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 NAPRTQ6XQN6 538 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 CARFQ8N187 725 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 PHC3Q8NDX5 983 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 OR4E2Q8NGC2 313 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 OR52E1Q8NGJ3 308 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 OR5K2Q8NHB8 316 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 LKAAEAR1Q8TD35 194 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 KCNE4Q8WWG9 221 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 JPH3Q8WXH2 748 aaPredicted RBP12.15□□□□□ -0.46
SLIRP-209ENST00000557342 UBXN4Q92575 508 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 ZNF592Q92610 1267 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 BIRC8Q96P09 236 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 TEFMQ96QE5 360 aaKnown RBP12.15□□□□□ -0.46
SLIRP-209ENST00000557342 HGH1Q9BTY7 390 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 DDA1Q9BW61 102 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 ASPSCR1Q9BZE9 553 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 DPH1Q9BZG8 443 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 ZNF768Q9H5H4 540 aaKnown RBP12.15□□□□□ -0.46
SLIRP-209ENST00000557342 SLC39A1Q9NY26 324 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 ZC3H7BQ9UGR2 993 aaKnown RBP12.15□□□□□ -0.46
SLIRP-209ENST00000557342 FBXO5Q9UKT4 447 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 ACSL6Q9UKU0 697 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 CDYLQ9Y232 598 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 PCDHGA3Q9Y5H0 932 aa12.15□□□□□ -0.46
SLIRP-209ENST00000557342 CHD8Q9HCK8 2581 aa12.14□□□□□ -0.47
SLIRP-209ENST00000557342 TLCD2A6NGC4 264 aa12.14□□□□□ -0.47
SLIRP-209ENST00000557342 PRAMEF10O60809 474 aa12.14□□□□□ -0.47
SLIRP-209ENST00000557342 SHMT2P34897 504 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms