RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 FAM229AH3BQW9 127 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 SCDO00767 359 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 MTSS1O43312 755 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 NPHS1O60500 1241 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 UBXN7O94888 489 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 FAM87AP0C7U9 286 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 OSMP13725 252 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 CYLC1P35663 651 aaPredicted RBP9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 CDKN2BP42772 138 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 PDX1P52945 283 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 UCNP55089 124 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 B4GALNT1Q00973 533 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 TLE3Q04726 772 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 ZFP36L1Q07352 338 aaKnown RBP9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 CCDC173Q0VFZ6 552 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 NR1D2Q14995 579 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 PYCR3Q53H96 274 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 CT83Q5H943 113 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 TFDP3Q5H9I0 405 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 HENMT1Q5T8I9 393 aaKnown RBP9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 LYPD4Q6UWN0 246 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 MFSD7Q6UXD7 560 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 NPNTQ6UXI9 565 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 RAB11FIP2Q7L804 512 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 SPRED1Q7Z699 444 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 CLEC14AQ86T13 490 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 TSPYL5Q86VY4 417 aaPredicted RBP9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 MYLK4Q86YV6 388 aaPredicted RBP9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 SPACA3Q8IXA5 215 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 KATNAL2Q8IYT4 538 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 FBXO39Q8N4B4 442 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 P3H4Q92791 437 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 TADA1Q96BN2 335 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 C16orf92Q96LL3 132 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 AGAP3Q96P47 875 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 OR2M4Q96R27 311 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 PANX2Q96RD6 677 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 TRIB3Q96RU7 358 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 AGAP2Q99490 1192 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 QRSL1Q9H0R6 528 aaKnown RBP9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 VPS18Q9P253 973 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 POLHQ9Y253 713 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 ZNF281Q9Y2X9 895 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 TMEM98Q9Y2Y6 226 aa9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.71□□□□□ -0.86
HNRNPC-228ENST00000557033 APC2O95996 2303 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 CASC3O15234 703 aaKnown RBP9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 B4GAT1O43505 415 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 CST8O60676 142 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 TNFSF15O95150 251 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 CPNE6O95741 557 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 EPOP01588 193 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 ITGA2BP08514 1039 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 TNNT1P13805 278 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 AK4P27144 223 aaPredicted RBP9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 MAP4P27816 1152 aaKnown RBP9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 DYNLT1P63172 113 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 ALDH6A1Q02252 535 aaKnown RBP9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 CDK18Q07002 472 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 PRKD1Q15139 912 aaPredicted RBP9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 SOWAHCQ53LP3 525 aaPredicted RBP9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 CPZQ66K79 652 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 DOK6Q6PKX4 331 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 SLC30A9Q6PML9 568 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 SHISA2Q6UWI4 295 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 LINC00114Q6XXX2 140 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 SPOCD1Q6ZMY3 1216 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 GPR155Q7Z3F1 870 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 PIM3Q86V86 326 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 CXorf67Q86X51 503 aaPredicted RBP9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 GALNT13Q8IUC8 556 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 TMTC1Q8IUR5 882 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 SFTPA2Q8IWL1 248 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 MFSD4AQ8N468 514 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 Q8N9G6 341 aaPredicted RBP9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 LSM14AQ8ND56 463 aaKnown RBP9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 TFB1MQ8WVM0 346 aaKnown RBP9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 KCNE4Q8WWG9 221 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 WDR24Q96S15 920 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 VAT1Q99536 393 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 CMKLR1Q99788 373 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 FOXP3Q9BZS1 431 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 GLOD4Q9HC38 313 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 EPB41L5Q9HCM4 733 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 SEPT10Q9P0V9 454 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 CNOT6Q9ULM6 557 aaKnown RBP9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 HYOU1Q9Y4L1 999 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 EPN1Q9Y6I3 576 aaPredicted RBP9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 ITPR1Q14643 2758 aa9.7□□□□□ -0.86
HNRNPC-228ENST00000557033 TEX51A0A1B0GUA7 166 aa9.69□□□□□ -0.86
HNRNPC-228ENST00000557033 HACD1B0YJ81 288 aa9.69□□□□□ -0.86
HNRNPC-228ENST00000557033 GPR89AB7ZAQ6 455 aa9.69□□□□□ -0.86
HNRNPC-228ENST00000557033 INPP4BO15327 924 aa9.69□□□□□ -0.86
HNRNPC-228ENST00000557033 NVLO15381 856 aaKnown RBP9.69□□□□□ -0.86
HNRNPC-228ENST00000557033 KLK10O43240 276 aa9.69□□□□□ -0.86
HNRNPC-228ENST00000557033 B3GALT2O43825 422 aa9.69□□□□□ -0.86
HNRNPC-228ENST00000557033 IPO7O95373 1038 aaKnown RBP9.69□□□□□ -0.86
HNRNPC-228ENST00000557033 NDST3O95803 873 aa9.69□□□□□ -0.86
HNRNPC-228ENST00000557033 GPR89BP0CG08 455 aa9.69□□□□□ -0.86
HNRNPC-228ENST00000557033 PTPN3P26045 913 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms