RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 CLUHO75153 1309 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 hCG_1818297A0A087WSY0 165 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 SMIM31A0A1B0GVY4 71 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 DENND3A2RUS2 1198 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 GOLGA8IPA6NC78 632 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 OR2W5A6NFC9 320 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 AQP12BA6NM10 295 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 GOLGA8JA6NMD2 632 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 FOXO6A8MYZ6 492 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 SGK1O00141 431 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 DDX39AO00148 427 aaKnown RBP4.72□□□□□ -1.65
ATXN3-246ENST00000557030 COPEO14579 308 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 ADAM10O14672 748 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 EXTL3O43909 919 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 KRT36O76013 467 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 TM7SF2O76062 418 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 STBD1O95210 358 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 CCNE2O96020 404 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 HLA-DRAP01903 254 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 INHBAP08476 426 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 KRT7P08729 469 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 TMEM191BP0C7N4 346 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 DHRS4L1P0CG22 281 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 CD58P19256 250 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 GLRA2P23416 452 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 CRABP2P29373 138 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 GJC1P36383 396 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 PIK3CAP42336 1068 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 GRK6P43250 576 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 NR4A2P43354 598 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 GMPSP49915 693 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-246ENST00000557030 POLE2P56282 527 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 PEX3P56589 373 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 YWHAEP62258 255 aaKnown RBP4.72□□□□□ -1.65
ATXN3-246ENST00000557030 SRSF1Q07955 248 aaKnown RBP eCLIP4.72□□□□□ -1.65
ATXN3-246ENST00000557030 CUL2Q13617 745 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 CNGA3Q16281 694 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 MAPK6Q16659 721 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 HADHQ16836 314 aaKnown RBP4.72□□□□□ -1.65
ATXN3-246ENST00000557030 KCTD19Q17RG1 926 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-246ENST00000557030 ACSBG2Q5FVE4 666 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 XKR9Q5GH70 373 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 TFDP3Q5H9I0 405 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 SH2D4BQ5SQS7 431 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 MAP3K21Q5TCX8 1036 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 DNAJC24Q6P3W2 148 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 MFSD7Q6UXD7 560 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 KYAT3Q6YP21 454 aaKnown RBP4.72□□□□□ -1.65
ATXN3-246ENST00000557030 DEF8Q6ZN54 512 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 C15orf39Q6ZRI6 1047 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 ARHGAP22Q7Z5H3 698 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 TTC30AQ86WT1 665 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 THNSL1Q8IYQ7 743 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 CPXCR1Q8N123 301 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 NIPA2Q8N8Q9 360 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 DRAXINQ8NBI3 349 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-246ENST00000557030 RFWD2Q8NHY2 731 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 TCP10LQ8TDR4 215 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 SLC44A1Q8WWI5 657 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 LZICQ8WZA0 190 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 NCSTNQ92542 709 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 LPAR1Q92633 364 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 CCDC127Q96BQ5 260 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 MTBPQ96DY7 904 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 C7orf26Q96N11 449 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 FCRL4Q96PJ5 515 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 RMDN3Q96TC7 470 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 ECSITQ9BQ95 431 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 C11orf70Q9BRQ4 267 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 NTPCRQ9BSD7 190 aaKnown RBP4.72□□□□□ -1.65
ATXN3-246ENST00000557030 C1orf21Q9H246 121 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 RPAP3Q9H6T3 665 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-246ENST00000557030 SUDS3Q9H7L9 328 aaPredicted RBP4.72□□□□□ -1.65
ATXN3-246ENST00000557030 ZDHHC7Q9NXF8 308 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 GRHPRQ9UBQ7 328 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 DNPEPQ9ULA0 475 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 GRID1Q9ULK0 1009 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 RPS6KL1Q9Y6S9 549 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 COMMD3-BMI1R4GMX3 469 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 RLFQ13129 1914 aa4.72□□□□□ -1.65
ATXN3-246ENST00000557030 CCDC187A0A096LP49 1063 aa4.71□□□□□ -1.66
ATXN3-246ENST00000557030 A0A1W2PPM1 405 aa4.71□□□□□ -1.66
ATXN3-246ENST00000557030 TMEM150BA6NC51 233 aa4.71□□□□□ -1.66
ATXN3-246ENST00000557030 M0QZQ0 153 aa4.71□□□□□ -1.66
ATXN3-246ENST00000557030 TRDMT1O14717 391 aaKnown RBP4.71□□□□□ -1.66
ATXN3-246ENST00000557030 PCDH17O14917 1159 aa4.71□□□□□ -1.66
ATXN3-246ENST00000557030 BIRC5O15392 142 aa4.71□□□□□ -1.66
ATXN3-246ENST00000557030 KCNAB3O43448 404 aa4.71□□□□□ -1.66
ATXN3-246ENST00000557030 CNOT3O75175 753 aaKnown RBP4.71□□□□□ -1.66
ATXN3-246ENST00000557030 TBX10O75333 385 aa4.71□□□□□ -1.66
ATXN3-246ENST00000557030 STAM2O75886 525 aa4.71□□□□□ -1.66
ATXN3-246ENST00000557030 KRT38O76015 456 aa4.71□□□□□ -1.66
ATXN3-246ENST00000557030 PENKP01210 267 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-246ENST00000557030 IFNB1P01574 187 aa4.71□□□□□ -1.66
ATXN3-246ENST00000557030 LYNP07948 512 aa4.71□□□□□ -1.66
ATXN3-246ENST00000557030 SNRPAP09012 282 aaKnown RBP4.71□□□□□ -1.66
ATXN3-246ENST00000557030 WEE2P0C1S8 567 aa4.71□□□□□ -1.66
ATXN3-246ENST00000557030 ANPEPP15144 967 aa4.71□□□□□ -1.66
ATXN3-246ENST00000557030 MMP8P22894 467 aa4.71□□□□□ -1.66
ATXN3-246ENST00000557030 RPS12P25398 132 aaKnown RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms