RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 ZNF460Q14592 562 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 CYTH1Q15438 398 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 ARHGAP15Q53QZ3 475 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 FASTKD1Q53R41 847 aaKnown RBP4.44□□□□□ -1.7
SRP54-212ENST00000556992 TAF1BQ53T94 588 aaPredicted RBP4.44□□□□□ -1.7
SRP54-212ENST00000556992 SIRPB2Q5JXA9 342 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 PPM1LQ5SGD2 360 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 TSTD2Q5T7W7 516 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 TXNDC8Q6A555 127 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 MRNIPQ6NTE8 343 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 SPATA31D4Q6ZUB0 917 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 FAM47EQ6ZV65 393 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 OTOAQ7RTW8 1153 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 GALNT7Q86SF2 657 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 TMEM150AQ86TG1 271 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 ZC3HC1Q86WB0 502 aaKnown RBP4.44□□□□□ -1.7
SRP54-212ENST00000556992 CRLF3Q8IUI8 442 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 CPXM2Q8N436 756 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 CARNMT1Q8N4J0 409 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 DCLK2Q8N568 766 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 SLC25A41Q8N5S1 370 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 ARL14EPQ8N8R7 260 aaPredicted RBP4.44□□□□□ -1.7
SRP54-212ENST00000556992 ZNF557Q8N988 423 aaPredicted RBP4.44□□□□□ -1.7
SRP54-212ENST00000556992 CHST14Q8NCH0 376 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 OR5M3Q8NGP4 307 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 RDH11Q8TC12 318 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 AUTS2Q8WXX7 1259 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 HERVK_113Q902F9 699 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 BADQ92934 168 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 VPS39Q96JC1 886 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 C7orf26Q96N11 449 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 DEPDC7Q96QD5 511 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 NUDCD1Q96RS6 583 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 FEM1AQ9BSK4 669 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 CINPQ9BW66 212 aaPredicted RBP4.44□□□□□ -1.7
SRP54-212ENST00000556992 TSSK1BQ9BXA7 367 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 ENKD1Q9H0I2 346 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 RHOJQ9H4E5 214 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 FAM96AQ9H5X1 160 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 PDFQ9HBH1 243 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 NOD2Q9HC29 1040 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 TRPC7Q9HCX4 862 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 ALG13Q9NP73 1137 aaKnown RBP4.44□□□□□ -1.7
SRP54-212ENST00000556992 ASAH2Q9NR71 780 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 SNX15Q9NRS6 342 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 TREX1Q9NSU2 369 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 MID2Q9UJV3 735 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 FBXO5Q9UKT4 447 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 SLC39A10Q9ULF5 831 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 RPL26L1Q9UNX3 145 aaKnown RBP4.44□□□□□ -1.7
SRP54-212ENST00000556992 PSAT1Q9Y617 370 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 CPQQ9Y646 472 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 MCM3APO60318 1980 aa4.44□□□□□ -1.7
SRP54-212ENST00000556992 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 H0YHG0 523 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 MYO1CO00159 1063 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 TRAFD1O14545 582 aaPredicted RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 ZNF197O14709 1029 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 LDB2O43679 373 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 HNRNPCL1O60812 293 aaKnown RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 CCDC22O60826 627 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 ZMPSTE24O75844 475 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 FSBPO95073 299 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 LUC7L3O95232 432 aaKnown RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 GLP2RO95838 553 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 SERPINE1P05121 402 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 C2P06681 752 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 ATXN1LP0C7T5 689 aaKnown RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 GAAP10253 952 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 IRF1P10914 325 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 RALBP11234 206 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 MYL4P12829 197 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 STMN1P16949 149 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 BGNP21810 368 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 PSMA3P25788 255 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 HOXD9P28356 352 aaPredicted RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 CD38P28907 300 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 HOXA9P31269 272 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 AVPR1AP37288 418 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 LEPRP48357 1165 aaKnown RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 CD151P48509 253 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 SCNN1BP51168 640 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 CLCN5P51795 746 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 KPNA2P52292 529 aaKnown RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 PLK1P53350 603 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 ARFIP2P53365 341 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 RAB10P61026 200 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 MAXP61244 160 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 AP1S1P61966 158 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 PRAMEP78395 509 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 ACVR1Q04771 509 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 ZBTB16Q05516 673 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 FOXI1Q12951 378 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 BNIP1Q12981 228 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 CTBP1Q13363 440 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 MSLNQ13421 630 aaPredicted RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 CDH18Q13634 790 aa4.43□□□□□ -1.7
SRP54-212ENST00000556992 TAF1AQ15573 450 aaPredicted RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 ZKSCAN8Q15776 578 aaPredicted RBP4.43□□□□□ -1.7
SRP54-212ENST00000556992 CHI3L2Q15782 390 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms