RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 ZBED8Q8IZ13 594 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 PYROXD1Q8WU10 500 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 LRRC39Q96DD0 335 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 PKNOX2Q96KN3 472 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 C5orf34Q96MH7 638 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 SERPINB12Q96P63 405 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 ZIM3Q96PE6 472 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 RUFY1Q96T51 708 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 GORASP1Q9BQQ3 440 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 ABCG8Q9H221 673 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 EPB41L4BQ9H329 900 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 LRRC40Q9H9A6 602 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 AKIRIN1Q9H9L7 192 aaPredicted RBP12.46□□□□□ -0.41
PSEN1-219ENST00000556951 SARS2Q9NP81 518 aaKnown RBP12.46□□□□□ -0.41
PSEN1-219ENST00000556951 KCTD5Q9NXV2 234 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 FAM53CQ9NYF3 392 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 OGFRQ9NZT2 677 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 KLHL3Q9UH77 587 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 PCDHGC4Q9Y5F7 938 aa12.46□□□□□ -0.41
PSEN1-219ENST00000556951 OAS3Q9Y6K5 1087 aaKnown RBP12.46□□□□□ -0.41
PSEN1-219ENST00000556951 CROCCQ5TZA2 2017 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 HEATR9A2RTY3 570 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 F5H423 210 aaPredicted RBP12.45□□□□□ -0.42
PSEN1-219ENST00000556951 KATNA1O75449 491 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 C9P02748 559 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 ABHD2P08910 425 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 ANKRD34CP0C6C1 535 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 DRD2P14416 443 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 CES1P23141 567 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 MAGEA3P43357 314 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 SH3BP2P78314 561 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 HHEXQ03014 270 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 NFATC2Q13469 925 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 MSS51Q4VC12 460 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 CCDC38Q502W7 563 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 RAET1GQ6H3X3 334 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 ADAMTSL4Q6UY14 1074 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 MARK2Q7KZI7 788 aaKnown RBP12.45□□□□□ -0.42
PSEN1-219ENST00000556951 LYSMD3Q7Z3D4 306 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 CROCCP2Q86T23 111 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 LINC00523Q86TU6 105 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 TSPAN33Q86UF1 283 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 PALM2Q8IXS6 379 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 Q8NA96 180 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 C9orf72Q96LT7 481 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 PSKH2Q96QS6 385 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 AGAP2Q99490 1192 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 CCDC77Q9BR77 488 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 MLPHQ9BV36 600 aaPredicted RBP12.45□□□□□ -0.42
PSEN1-219ENST00000556951 TBC1D10AQ9BXI6 508 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 ULBP3Q9BZM4 244 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 NT5MQ9NPB1 228 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 TBC1D29Q9UFV1 150 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 SLC5A6Q9Y289 635 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 PPIL1Q9Y3C6 166 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 NFS1Q9Y697 457 aa12.45□□□□□ -0.42
PSEN1-219ENST00000556951 MN1Q10571 1320 aaPredicted RBP12.44□□□□□ -0.42
PSEN1-219ENST00000556951 PIPSLA2A3N6 862 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 NPIPB15A6NHN6 443 aaPredicted RBP12.44□□□□□ -0.42
PSEN1-219ENST00000556951 SDR42E2A6NKP2 422 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 AGPSO00116 658 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 DNAJC6O75061 913 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 AVILO75366 819 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 ACSL3O95573 720 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 GSTA2P09210 222 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 NPY2RP49146 381 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 EPHA4P54764 986 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 GFERP55789 205 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 AP1S1P61966 158 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 ITKQ08881 620 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 IFFO1Q0D2I5 559 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 MPP3Q13368 585 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 LAMB3Q13751 1172 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 ZNF235Q14590 738 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 HSP90B2PQ58FF3 399 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 ZNF534Q76KX8 674 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 NLRP8Q86W28 1048 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 PGBD5Q8N414 524 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 FBXO36Q8NEA4 188 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 SCAMP4Q969E2 229 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 SCRN2Q96FV2 425 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 IMP4Q96G21 291 aaKnown RBP12.44□□□□□ -0.42
PSEN1-219ENST00000556951 OXNAD1Q96HP4 312 aaPredicted RBP12.44□□□□□ -0.42
PSEN1-219ENST00000556951 COX14Q96I36 57 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 SMIM14Q96QK8 99 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 MCCC1Q96RQ3 725 aaPredicted RBP12.44□□□□□ -0.42
PSEN1-219ENST00000556951 TMEM109Q9BVC6 243 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 CINPQ9BW66 212 aaPredicted RBP12.44□□□□□ -0.42
PSEN1-219ENST00000556951 POLR1EQ9GZS1 481 aaKnown RBP12.44□□□□□ -0.42
PSEN1-219ENST00000556951 TWSG1Q9GZX9 223 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 MED4Q9NPJ6 270 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 PRKAB1Q9Y478 270 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 TTLL3Q9Y4R7 772 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 TEX264Q9Y6I9 313 aa12.44□□□□□ -0.42
PSEN1-219ENST00000556951 FBN1P35555 2871 aaKnown RBP12.44□□□□□ -0.42
PSEN1-219ENST00000556951 A0A087WUV0 522 aaPredicted RBP12.43□□□□□ -0.42
PSEN1-219ENST00000556951 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.43□□□□□ -0.42
PSEN1-219ENST00000556951 PSMD11O00231 422 aa12.43□□□□□ -0.42
PSEN1-219ENST00000556951 SPAG6O75602 509 aa12.43□□□□□ -0.42
PSEN1-219ENST00000556951 KIAA0754O94854 1291 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms