RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PITPNM3Q9BZ71 974 aa11.53□□□□□ -0.56
ACTN1-221ENST00000556571 IGSF5Q9NSI5 407 aa11.53□□□□□ -0.56
ACTN1-221ENST00000556571 ENTPD4Q9Y227 616 aa11.53□□□□□ -0.56
ACTN1-221ENST00000556571 PCDHGA10Q9Y5H3 936 aa11.53□□□□□ -0.56
ACTN1-221ENST00000556571 C3orf70A6NLC5 250 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-221ENST00000556571 GAPDHSO14556 408 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-221ENST00000556571 BUD23O43709 281 aaKnown RBP11.52□□□□□ -0.57
ACTN1-221ENST00000556571 POLBP06746 335 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 TPM1P09493 284 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 ST6GAL1P15907 406 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 CD68P34810 354 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-221ENST00000556571 FOLR3P41439 243 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 LMAN1P49257 510 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 PER3P56645 1201 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 ZBED6P86452 979 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 NAA30Q147X3 362 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-221ENST00000556571 BCL7AQ4VC05 210 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 MLIPQ5VWP3 458 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 SPOCD1Q6ZMY3 1216 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 B4GALNT4Q76KP1 1039 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 CFAP206Q8IYR0 622 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 SLC25A41Q8N5S1 370 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 CTNNBL1Q8WYA6 563 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-221ENST00000556571 INPP5DQ92835 1189 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 TRAPPC9Q96Q05 1148 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 P4HTMQ9NXG6 502 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 FAM8A1Q9UBU6 413 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 GPN3Q9UHW5 284 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-221ENST00000556571 PTRH2Q9Y3E5 179 aaKnown RBP11.52□□□□□ -0.57
ACTN1-221ENST00000556571 AP1M2Q9Y6Q5 423 aa11.52□□□□□ -0.57
ACTN1-221ENST00000556571 BTN3A3O00478 584 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 STX7O15400 261 aaKnown RBP11.51□□□□□ -0.57
ACTN1-221ENST00000556571 LRRTM2O43300 516 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 PRAMEF1O95521 474 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 NFKB1P19838 968 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 POU3F2P20265 443 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-221ENST00000556571 HNRNPH3P31942 346 aaKnown RBP11.51□□□□□ -0.57
ACTN1-221ENST00000556571 CHRNA4P43681 627 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 NR2C2P49116 596 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 MESDQ14696 234 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 PRKD1Q15139 912 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-221ENST00000556571 LLGL1Q15334 1064 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 SLC1A5Q15758 541 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 CDHR3Q6ZTQ4 885 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 CUZD1Q86UP6 607 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 RFX6Q8HWS3 928 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 OR2Y1Q8NGV0 311 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 HM13Q8TCT9 377 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 CPLX3Q8WVH0 158 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 TFB1MQ8WVM0 346 aaKnown RBP11.51□□□□□ -0.57
ACTN1-221ENST00000556571 N4BP2L2Q92802 583 aaPredicted RBP11.51□□□□□ -0.57
ACTN1-221ENST00000556571 MARVELD3Q96A59 401 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 PTERQ96BW5 349 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 DCUN1D1Q96GG9 259 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 MRGPRX2Q96LB1 330 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 FERD3LQ96RJ6 166 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 TFB2MQ9H5Q4 396 aaKnown RBP11.51□□□□□ -0.57
ACTN1-221ENST00000556571 ATP13A2Q9NQ11 1180 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 CAPN11Q9UMQ6 739 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 NENFQ9UMX5 172 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 NTNG1Q9Y2I2 539 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 LUC7L2Q9Y383 392 aaKnown RBP11.51□□□□□ -0.57
ACTN1-221ENST00000556571 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.51□□□□□ -0.57
ACTN1-221ENST00000556571 APCP25054 2843 aa11.51□□□□□ -0.57
ACTN1-221ENST00000556571 MDC1Q14676 2089 aaKnown RBP11.5□□□□□ -0.57
ACTN1-221ENST00000556571 SVILO95425 2214 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 C17orf113A0A1B0GUU1 675 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 C2orf74A8MZ97 194 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 IFRD1O00458 451 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-221ENST00000556571 BTN3A1O00481 513 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 OR2B3O76000 313 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 CBSLP0DN79 551 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 RALBP11234 206 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 PVRP15151 417 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 CBSP35520 551 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 RIPPLY3P57055 190 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 DYNLT1P63172 113 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 DCDP81605 110 aaKnown RBP11.5□□□□□ -0.57
ACTN1-221ENST00000556571 WASHC5Q12768 1159 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 MPP3Q13368 585 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 ZRSR2Q15696 482 aaKnown RBP11.5□□□□□ -0.57
ACTN1-221ENST00000556571 CYP2A13Q16696 494 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 ODF2Q5BJF6 829 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 LRRC38Q5VT99 294 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 SP5Q6BEB4 398 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-221ENST00000556571 RHBDD2Q6NTF9 364 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 SARM1Q6SZW1 724 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 DAAM2Q86T65 1068 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 KCNMB4Q86W47 210 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 LILRA3Q8N6C8 439 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-221ENST00000556571 PROKR1Q8TCW9 393 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 COG1Q8WTW3 980 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.5□□□□□ -0.57
ACTN1-221ENST00000556571 NACC2Q96BF6 587 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 OXNAD1Q96HP4 312 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-221ENST00000556571 RBM41Q96IZ5 413 aaKnown RBP11.5□□□□□ -0.57
ACTN1-221ENST00000556571 FCRL5Q96RD9 977 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 VAT1Q99536 393 aa11.5□□□□□ -0.57
ACTN1-221ENST00000556571 WDR77Q9BQA1 342 aaPredicted RBP11.5□□□□□ -0.57
ACTN1-221ENST00000556571 AP1M1Q9BXS5 423 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms