RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 CCDC188H7C350 402 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 TRIM77I1YAP6 450 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 WDR46O15213 610 aaKnown RBP5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 OR10H2O60403 315 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 CTAGE8P0CG41 777 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 GLULP15104 373 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 GP5P40197 560 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 PITX1P78337 314 aaPredicted RBP5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 FHL1Q13642 323 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 IZUMO4Q1ZYL8 232 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 ALDH1L2Q3SY69 923 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 GRTP1Q5TC63 336 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 LINGO4Q6UY18 593 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 ZBTB49Q6ZSB9 765 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 FAM47EQ6ZV65 393 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 RBM23Q86U06 439 aaKnown RBP5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 CTAGE4Q8IX94 777 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 GPALPP1Q8IXQ4 340 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 SETD6Q8TBK2 473 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 SORCS1Q8WY21 1168 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 POLR3CQ9BUI4 534 aaPredicted RBP5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 C1QTNF4Q9BXJ3 329 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 EVA1AQ9H8M9 152 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 OSER1Q9NX31 292 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 PCDHGB1Q9Y5G3 927 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 LIPGQ9Y5X9 500 aa5.14□□□□□ -1.59
CKS1BP1-201ENST00000555221 A0A1W2PS18 150 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 FEZF1A0PJY2 475 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 FAM170AA1A519 330 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 DENND3A2RUS2 1198 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 TMEM221A6NGB7 291 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 ACOT8O14734 319 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 SYNGR3O43761 229 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 SLC28A2O43868 658 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 RPN1P04843 607 aaKnown RBP5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 SLC6A6P31641 620 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 HOXA1P49639 335 aaPredicted RBP5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 ASCL1P50553 236 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 FUT6P51993 359 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 HNRNPKP61978 463 aaKnown RBP eCLIP5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 RPS18P62269 152 aaKnown RBP5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 RBP5P82980 135 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 ACSM1Q08AH1 577 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 MFAP5Q13361 173 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 SCARB2Q14108 478 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 MDH1BQ5I0G3 518 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 PDSS1Q5T2R2 415 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 PET117Q6UWS5 81 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 PIWIL4Q7Z3Z4 852 aaKnown RBP5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 EXOC3L1Q86VI1 746 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 CEP57L1Q8IYX8 460 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 CPSF7Q8N684 471 aaKnown RBP5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 SLC4A11Q8NBS3 891 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 OR5M8Q8NGP6 311 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 ZNF558Q96NG5 402 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 LRRC4Q9HBW1 653 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 ABCF3Q9NUQ8 709 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 CPSF3Q9UKF6 684 aaKnown RBP5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 ABT1Q9ULW3 272 aaKnown RBP5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 NOL7Q9UMY1 257 aaKnown RBP5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 PADI2Q9Y2J8 665 aa5.13□□□□□ -1.59
CKS1BP1-201ENST00000555221 TEX13DA0A0J9YY54 714 aaPredicted RBP5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 A0A1W2PPQ1 181 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 HYKKA2RU49 373 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 C5orf60A6NFR6 353 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 TULP2O00295 520 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 CLDN4O14493 209 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 PTGESO14684 152 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 PENKP01210 267 aaPredicted RBP5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 SNRNP70P08621 437 aaKnown RBP5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 OR52Z1P0C646 297 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 FGF3P11487 239 aaPredicted RBP5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 PLA2G2AP14555 144 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 CKMT2P17540 419 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 TCEA1P23193 301 aaKnown RBP5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 NPY4RP50391 375 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 TPD52P55327 224 aaPredicted RBP5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 RPL24P83731 157 aaKnown RBP5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 PPARDQ03181 441 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 BFSP1Q12934 665 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 PRKAA1Q13131 559 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 PPIGQ13427 754 aaKnown RBP eCLIP5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 ZNF273Q14593 569 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 ZNF324BQ6AW86 544 aaPredicted RBP5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 PRR27Q6MZM9 219 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 PRSS57Q6UWY2 283 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 KCTD8Q6ZWB6 473 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 COMMD2Q86X83 199 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 FAM114A1Q8IWE2 563 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 NAGSQ8N159 534 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 METTL27Q8N6F8 245 aaPredicted RBP5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 DEPDC1BQ8WUY9 529 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 FAM162AQ96A26 154 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 SPSB1Q96BD6 273 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 RMDN2Q96LZ7 410 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 FERMT1Q9BQL6 677 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 ACKR4Q9NPB9 350 aa5.12□□□□□ -1.59
CKS1BP1-201ENST00000555221 A0A1W2PPI3 338 aa5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 BAG4O95429 457 aaKnown RBP5.11□□□□□ -1.59
CKS1BP1-201ENST00000555221 IGHV4-39P01824 125 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms