RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 UCMAQ8WVF2 138 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 CLPTM1LQ96KA5 538 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 CDK15Q96Q40 435 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 P2RY13Q9BPV8 354 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 NOL11Q9H8H0 719 aaKnown RBP8.71□□□□□ -1.01
TDP1-210ENST00000554976 NKX1-2Q9UD57 310 aaPredicted RBP8.71□□□□□ -1.01
TDP1-210ENST00000554976 TRPS1Q9UHF7 1281 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 SLC7A8Q9UHI5 535 aa8.71□□□□□ -1.01
TDP1-210ENST00000554976 ZFR2Q9UPR6 939 aaKnown RBP8.71□□□□□ -1.01
TDP1-210ENST00000554976 CCDC85CA6NKD9 419 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 QSOX1O00391 747 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 AHCYL1O43865 530 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 SNX2O60749 519 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 SORBS2O94875 1100 aaKnown RBP8.71□□□□□ -1.02
TDP1-210ENST00000554976 FTH1P02794 183 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 EPHX1P07099 455 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 GNAZP19086 355 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 COL9A1P20849 921 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 HSPA7P48741 367 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 HTR6P50406 440 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 FGL2Q14314 439 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 TMEM196Q5HYL7 178 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 FBXL19Q6PCT2 694 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 NET1Q7Z628 596 aaPredicted RBP8.71□□□□□ -1.02
TDP1-210ENST00000554976 SNX32Q86XE0 403 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 TP53I13Q8NBR0 393 aaPredicted RBP8.71□□□□□ -1.02
TDP1-210ENST00000554976 FBXO15Q8NCQ5 510 aaPredicted RBP8.71□□□□□ -1.02
TDP1-210ENST00000554976 USP7Q93009 1102 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 SPDL1Q96EA4 605 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 CCM2Q9BSQ5 444 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 PARVBQ9HBI1 364 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 SDR39U1Q9NRG7 319 aaPredicted RBP8.71□□□□□ -1.02
TDP1-210ENST00000554976 UTP6Q9NYH9 597 aaKnown RBP8.71□□□□□ -1.02
TDP1-210ENST00000554976 FIS1Q9Y3D6 152 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 TIMM22Q9Y584 194 aa8.71□□□□□ -1.02
TDP1-210ENST00000554976 C1QTNF3-AMACRE9PGA6 284 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 NPIPB8E9PQR5 432 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 ANKRD28O15084 1053 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 LSM1O15116 133 aaKnown RBP8.7□□□□□ -1.02
TDP1-210ENST00000554976 UBDO15205 165 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 MID1O15344 667 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 VPS4BO75351 444 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 ADH1BP00325 375 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 FESP07332 822 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 THRAP10827 490 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 MSH3P20585 1137 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 PFN3P60673 137 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 CST6Q15828 149 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 SNCBQ16143 134 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 ZNF284Q2VY69 593 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 DNAJC14Q6Y2X3 702 aaPredicted RBP8.7□□□□□ -1.02
TDP1-210ENST00000554976 GK5Q6ZS86 529 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 FRA10AC1Q70Z53 315 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 LRRC56Q8IYG6 542 aaPredicted RBP8.7□□□□□ -1.02
TDP1-210ENST00000554976 SPDYE1Q8NFV5 336 aaPredicted RBP8.7□□□□□ -1.02
TDP1-210ENST00000554976 FBXL8Q96CD0 374 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 CCT7Q99832 543 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 AIG1Q9NVV5 245 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 CLDND1Q9NY35 253 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 ATXN10Q9UBB4 475 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 TSR3Q9UJK0 312 aaKnown RBP8.7□□□□□ -1.02
TDP1-210ENST00000554976 BTRCQ9Y297 605 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 TMEM265A0A087WTH1 108 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 KRT87PA6NCN2 255 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 ASPDHA6ND91 283 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 OR2AG2A6NM03 316 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 ARHGEF33A8MVX0 844 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 K7EPI3 171 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 PLRG1O43660 514 aaKnown RBP8.7□□□□□ -1.02
TDP1-210ENST00000554976 EGFP01133 1207 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 LINC00032P0C843 101 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 C5AR1P21730 350 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 PGM1P36871 562 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 GDF5P43026 501 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 MTTPP55157 894 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 CYLC2Q14093 348 aaPredicted RBP8.7□□□□□ -1.02
TDP1-210ENST00000554976 IER5LQ5T953 404 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 NEK5Q6P3R8 708 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 HACD2Q6Y1H2 254 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 UBE2R2Q712K3 238 aaPredicted RBP8.7□□□□□ -1.02
TDP1-210ENST00000554976 LRRC70Q7Z2Q7 622 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 TRIM46Q7Z4K8 759 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 DSG4Q86SJ6 1040 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 SCUBE1Q8IWY4 988 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 SFRP1Q8N474 314 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 KCNV2Q8TDN2 545 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 RSRC1Q96IZ7 334 aaKnown RBP8.7□□□□□ -1.02
TDP1-210ENST00000554976 NECTIN4Q96NY8 510 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 TEX101Q9BY14 249 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 MRGBPQ9NV56 204 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 ZNF232Q9UNY5 417 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 NEUROG3Q9Y4Z2 214 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 ATP6AP2A0A1C7CYW4 349 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 ATP6AP2O75787 350 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 EBLN1P0CF75 366 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 PRPH2P23942 346 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 HOXD11P31277 338 aaPredicted RBP8.7□□□□□ -1.02
TDP1-210ENST00000554976 CTHP32929 405 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 RPIAP49247 311 aa8.7□□□□□ -1.02
TDP1-210ENST00000554976 HNMTP50135 292 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms