RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 TEX51A0A1B0GUA7 166 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 LIN7AO14910 233 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-211ENST00000554310 RASSF9O75901 435 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 OR56A5P0C7T3 313 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 CD151P48509 253 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 VPS41P49754 854 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 SLC7A5Q01650 507 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 MC2RQ01718 297 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 PLOD1Q02809 727 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-211ENST00000554310 TRIP13Q15645 432 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-211ENST00000554310 SYTL3Q4VX76 610 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 ANKS6Q68DC2 871 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 IRGCQ6NXR0 463 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 EMBQ6PCB8 327 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 CEACAM20Q6UY09 585 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 OOSP2Q86WS3 158 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 ZFAND4Q86XD8 727 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 DTX1Q86Y01 620 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 ACVR1CQ8NER5 493 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 SNRNP27Q8WVK2 155 aaKnown RBP12.74□□□□□ -0.37
SHMT2-211ENST00000554310 CCNL2Q96S94 520 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-211ENST00000554310 CD180Q99467 661 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 KIFC1Q9BW19 673 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 TSSK1BQ9BXA7 367 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 FBXO8Q9NRD0 319 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 CHRAC1Q9NRG0 131 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 CATSPERZQ9NTU4 200 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 ANAPC5Q9UJX4 755 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 B3GALT1Q9Y5Z6 326 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 PRSS21Q9Y6M0 314 aa12.74□□□□□ -0.37
SHMT2-211ENST00000554310 OR5K3A6NET4 321 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 MATN2O00339 956 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 RAD51CO43502 376 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 MYBL2P10244 700 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 MLNP12872 115 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 MGAT1P26572 445 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 PREPP48147 710 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 TTPAP49638 278 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 ATP1A2P50993 1020 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 CRADDP78560 199 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 GABPB1Q06547 395 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-211ENST00000554310 VAC14Q08AM6 782 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 KRT33BQ14525 404 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 CACHD1Q5VU97 1274 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 CYB5D1Q6P9G0 228 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 CCDC81Q6ZN84 652 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 KLHL7Q8IXQ5 586 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 CARFQ8N187 725 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 ELMO1Q92556 727 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 CAVIN3Q969G5 261 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 MVB12BQ9H7P6 319 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 CPNE5Q9HCH3 593 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 XAB2Q9HCS7 855 aaKnown RBP12.73□□□□□ -0.37
SHMT2-211ENST00000554310 SYBUQ9NX95 663 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 SEMA5BQ9P283 1151 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 RALYQ9UKM9 306 aaKnown RBP12.73□□□□□ -0.37
SHMT2-211ENST00000554310 SOX13Q9UN79 622 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 NEU2Q9Y3R4 380 aa12.73□□□□□ -0.37
SHMT2-211ENST00000554310 ATRXP46100 2492 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 MGAQ8IWI9 3026 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 TCRBV7S3A2A0A539 114 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 TLCD2A6NGC4 264 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 K7ENP7 123 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 CD3EAPO15446 510 aaKnown RBP12.72□□□□□ -0.37
SHMT2-211ENST00000554310 KIF1CO43896 1103 aaKnown RBP12.72□□□□□ -0.37
SHMT2-211ENST00000554310 OR1I1O60431 355 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 TMEM63AO94886 807 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 NMBRP28336 390 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 PDHA2P29803 388 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 BOP1Q14137 746 aaKnown RBP12.72□□□□□ -0.37
SHMT2-211ENST00000554310 SEMA3AQ14563 771 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 TGIF1Q15583 401 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 KIAA0930Q6ICG6 404 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-211ENST00000554310 ARMC6Q6NXE6 501 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 INO80CQ6PI98 192 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-211ENST00000554310 FAM92BQ6ZTR7 304 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 MAATS1Q7Z4T9 603 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 KMT5CQ86Y97 462 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 MCUQ8NE86 351 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 JPH3Q8WXH2 748 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-211ENST00000554310 KLHL6Q8WZ60 621 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 CPT1BQ92523 772 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 UBL7Q96S82 380 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-211ENST00000554310 HRASLS2Q9NWW9 162 aa12.72□□□□□ -0.37
SHMT2-211ENST00000554310 SLC5A10A0PJK1 596 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 OR6C74A6NCV1 312 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 PRMT5O14744 637 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-211ENST00000554310 POLR1CO15160 346 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-211ENST00000554310 NELFEP18615 380 aaKnown RBP12.71□□□□□ -0.37
SHMT2-211ENST00000554310 PAMP19021 973 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 ARNTP27540 789 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 SEPHS1P49903 392 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 PPP1CAP62136 330 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 GUCY2DQ02846 1103 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 FOXM1Q08050 763 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 PRKAA1Q13131 559 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 CUL1Q13616 776 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 IL11RAQ14626 422 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 MANEAQ5SRI9 462 aa12.71□□□□□ -0.37
SHMT2-211ENST00000554310 RNF187Q5TA31 235 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms