RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 XAB2Q9HCS7 855 aaKnown RBP7.57□□□□□ -1.2
ABCD4-220ENST00000553998 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.57□□□□□ -1.2
ABCD4-220ENST00000553998 PKD2L2Q9NZM6 624 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 BFARQ9NZS9 450 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 NFKBIL1Q9UBC1 381 aaPredicted RBP7.57□□□□□ -1.2
ABCD4-220ENST00000553998 CPNE7Q9UBL6 633 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 EPHA6Q9UF33 1036 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 RIMKLBQ9ULI2 386 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 CNOT6Q9ULM6 557 aaKnown RBP7.57□□□□□ -1.2
ABCD4-220ENST00000553998 SLC5A6Q9Y289 635 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 ZNF451Q9Y4E5 1061 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 APCP25054 2843 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 CACNA1DQ01668 2161 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 POLQO75417 2590 aa7.57□□□□□ -1.2
ABCD4-220ENST00000553998 DNHD1Q96M86 4753 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 ZNF106Q9H2Y7 1883 aaKnown RBP7.56□□□□□ -1.2
ABCD4-220ENST00000553998 EFCAB8A8MWE9 144 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 RAD51CO43502 376 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 DPM1O60762 260 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 SEC31AO94979 1220 aaKnown RBP7.56□□□□□ -1.2
ABCD4-220ENST00000553998 CLDN7O95471 211 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 PSMA3P25788 255 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 PTPN4P29074 926 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 NPY2RP49146 381 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 SPINT3P49223 89 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 DRG2P55039 364 aaKnown RBP7.56□□□□□ -1.2
ABCD4-220ENST00000553998 GFERP55789 205 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 SH3BP2P78314 561 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 MORF4L2Q15014 288 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 CHRNA6Q15825 494 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 KRTAP21-3Q3LHN1 58 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 CRB2Q5IJ48 1285 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 DNTTIP2Q5QJE6 756 aaKnown RBP7.56□□□□□ -1.2
ABCD4-220ENST00000553998 CYB5D1Q6P9G0 228 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 DOK6Q6PKX4 331 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 RFLNAQ6ZTI6 216 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 NLRP9Q7RTR0 991 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 GLT6D1Q7Z4J2 308 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 SYVN1Q86TM6 617 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 PPP1R3BQ86XI6 285 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 RASGRP3Q8IV61 690 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 SRRM1Q8IYB3 904 aaKnown RBP7.56□□□□□ -1.2
ABCD4-220ENST00000553998 TTC30BQ8N4P2 665 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 NAT8LQ8N9F0 302 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 OR52K1Q8NGK4 314 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 PRR7Q8TB68 274 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 ADAMTS17Q8TE56 1095 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 SCAMP4Q969E2 229 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 AP2M1Q96CW1 435 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 SNF8Q96H20 258 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 PLEKHG4BQ96PX9 1271 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 SMIM14Q96QK8 99 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 OR6C1Q96RD1 312 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 RANBP9Q96S59 729 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 AGAP2Q99490 1192 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 TRIM51Q9BSJ1 452 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 IL22Q9GZX6 179 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 RAB33BQ9H082 229 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 ZMYND15Q9H091 742 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 RAB17Q9H0T7 212 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 ING2Q9H160 280 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 FAM83DQ9H4H8 585 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 ACTL8Q9H568 366 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 AKIRIN1Q9H9L7 192 aaPredicted RBP7.56□□□□□ -1.2
ABCD4-220ENST00000553998 KLHL3Q9UH77 587 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 SHOC2Q9UQ13 582 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 UTP11Q9Y3A2 253 aaKnown RBP7.56□□□□□ -1.2
ABCD4-220ENST00000553998 PKP3Q9Y446 797 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 SPO11Q9Y5K1 396 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 SLC30A1Q9Y6M5 507 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 ADGRG4Q8IZF6 3080 aa7.56□□□□□ -1.2
ABCD4-220ENST00000553998 C2CD3Q4AC94 2353 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 NF1P21359 2839 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 TCRBV7S3A2A0A539 114 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 MAGEB16A2A368 324 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 HEATR9A2RTY3 570 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 STX7O15400 261 aaKnown RBP7.55□□□□□ -1.2
ABCD4-220ENST00000553998 TMEM63AO94886 807 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 UBXN7O94888 489 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 PIRTP0C851 137 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 NELFEP18615 380 aaKnown RBP7.55□□□□□ -1.2
ABCD4-220ENST00000553998 ADRA1DP25100 572 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 HADHAP40939 763 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 GRIA1P42261 906 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 MAGEA3P43357 314 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 CCL11P51671 97 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 ZNF140P52738 457 aaPredicted RBP7.55□□□□□ -1.2
ABCD4-220ENST00000553998 TUBB4BP68371 445 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 CALCOCO2Q13137 446 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 CBLBQ13191 982 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 OLIG2Q13516 323 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 PTPRRQ15256 657 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 PRR30Q53SZ7 412 aaPredicted RBP7.55□□□□□ -1.2
ABCD4-220ENST00000553998 DNAJC21Q5F1R6 531 aaKnown RBP7.55□□□□□ -1.2
ABCD4-220ENST00000553998 ZRANB3Q5FWF4 1079 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 PCID2Q5JVF3 399 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 HENMT1Q5T8I9 393 aaKnown RBP7.55□□□□□ -1.2
ABCD4-220ENST00000553998 ANKRD22Q5VYY1 191 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 IZUMO3Q5VZ72 239 aa7.55□□□□□ -1.2
ABCD4-220ENST00000553998 CPZQ66K79 652 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms