RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 GTF2IRD2Q86UP8 949 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 SERPINA9Q86WD7 417 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 CHDHQ8NE62 594 aaPredicted RBP6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 GIPC3Q8TF64 312 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 BHMTQ93088 406 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 RHBDF1Q96CC6 855 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 SLC47A1Q96FL8 570 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 ITCHQ96J02 903 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 TTLL2Q9BWV7 592 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 TM6SF2Q9BZW4 377 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 PAIP1Q9H074 479 aaKnown RBP6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 RNF38Q9H0F5 515 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 ING2Q9H160 280 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 ADNPQ9H2P0 1102 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 RRAGCQ9HB90 399 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 COMMD8Q9NX08 183 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 VNN3Q9NY84 501 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 KLQ9UEF7 1012 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 LIMD1Q9UGP4 676 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 VPS9D1Q9Y2B5 631 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 SCN5AQ14524 2016 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 LAMA2P24043 3122 aaKnown RBP6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 A0A1B0GVM2 712 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 KRT87PA6NCN2 255 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 ZNF840PA6NDX5 716 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 ARVCFO00192 962 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 PRMT5O14744 637 aaPredicted RBP6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 XYLBO75191 536 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 PRKD3O94806 890 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 NPPAP01160 153 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 HNRNPCP07910 306 aaKnown RBP eCLIP6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 PRKACGP22612 351 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 ACLYP53396 1101 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 PLA2G16P53816 162 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 PHC1P78364 1004 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 CHRNB3Q05901 458 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 CACNG1Q06432 222 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 CD47Q08722 323 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 GRSF1Q12849 480 aaKnown RBP eCLIP6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 KCNAB2Q13303 367 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 SLC14A1Q13336 389 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 ZNF177Q13360 481 aaPredicted RBP6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 LAPTM4AQ15012 233 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 LDLRAP1Q5SW96 308 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 SPESP1Q6UW49 350 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 MILR1Q7Z6M3 343 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 ZNF554Q86TJ5 538 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 CHPFQ8IZ52 775 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 SPARTQ8N0X7 666 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 SLC15A4Q8N697 577 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 PDZD8Q8NEN9 1154 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 OR8J3Q8NGG0 315 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 MIPOL1Q8TD10 442 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 GLT1D1Q96MS3 346 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 CASD1Q96PB1 797 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 BARD1Q99728 777 aaKnown RBP6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 THUMPD3Q9BV44 507 aaKnown RBP6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 OSBPL10Q9BXB5 764 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 ADGRE3Q9BY15 652 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 ACTR8Q9H981 624 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 FAM118AQ9NWS6 357 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 ADGRE2Q9UHX3 823 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 ZNF510Q9Y2H8 683 aa6.8□□□□□ -1.32
LINC-ROR-201ENST00000553704 OBSL1O75147 1896 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 TRBV5-3A0A0A0MS03 114 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 TMEM88BA6NKF7 163 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 A8MX80 341 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 G3V2T6 193 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 H0Y626 953 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 CXCR6O00574 342 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 MAN1A2O60476 641 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 ABCB7O75027 752 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 TRIM16O95361 564 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 SEC24AO95486 1093 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 ZBTB11O95625 1053 aaPredicted RBP6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 GLUD1P00367 558 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 OTCP00480 354 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 CST1P01037 141 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 GSNP06396 782 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 HMGA1P17096 107 aaKnown RBP6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 JUNBP17275 347 aaPredicted RBP6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 PFKLP17858 780 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 CCNA2P20248 432 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 MAP4P27816 1152 aaKnown RBP6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 CST5P28325 142 aaPredicted RBP6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 BMXP51813 675 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 KPNA1P52294 538 aaPredicted RBP6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 BFSP2Q13515 415 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 GPNMBQ14956 572 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 SPCS2Q15005 226 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 BROXQ5VW32 411 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 PTRHD1Q6GMV3 140 aaKnown RBP6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 GALNT18Q6P9A2 607 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 SLC16A12Q6ZSM3 486 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 ZNF551Q7Z340 670 aaPredicted RBP6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 BTLAQ7Z6A9 289 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 NECAB2Q7Z6G3 386 aa6.79□□□□□ -1.32
LINC-ROR-201ENST00000553704 THAP5Q7Z6K1 395 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms