RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SLC40A1Q9NP59 571 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 PARVAQ9NVD7 372 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 NFKBIL1Q9UBC1 381 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-219ENST00000553488 RARRES3Q9UL19 164 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 SRPK3Q9UPE1 567 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 CHKBQ9Y259 395 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 CACNA1CQ13936 2221 aa7.12□□□□□ -1.27
ATXN3-219ENST00000553488 RGSL1A5PLK6 1076 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 PDZK1P1A8MUH7 402 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 MFSD11O43934 449 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 MTA2O94776 668 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 TMEM63AO94886 807 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 JCHAINP01591 159 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 HLA-DQB2P05538 268 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 CAPN1P07384 714 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 MMP2P08253 660 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 ZNF7P17097 686 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-219ENST00000553488 IL4RP24394 825 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 SERPINB6P35237 376 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 PCK1P35558 622 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 EPHB1P54762 984 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 ITGA1P56199 1179 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 DCDC1P59894 354 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 RPL26P61254 145 aaKnown RBP7.11□□□□□ -1.27
ATXN3-219ENST00000553488 NIPAL4Q0D2K0 466 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 SYCP1Q15431 976 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 SEPT7Q16181 437 aaKnown RBP7.11□□□□□ -1.27
ATXN3-219ENST00000553488 KHDC1Q4VXA5 237 aaKnown RBP7.11□□□□□ -1.27
ATXN3-219ENST00000553488 ZRANB3Q5FWF4 1079 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 CRB2Q5IJ48 1285 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 ZNF569Q5MCW4 686 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 AGAP9Q5VTM2 703 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 FAM69BQ5VUD6 431 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 PRAMEF13Q5VWM6 474 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 TXNRD3NBQ6F5E7 133 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 LCN10Q6JVE6 187 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 IRGCQ6NXR0 463 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 CYB5D1Q6P9G0 228 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 FAM198BQ6UWH4 519 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 WASH2PQ6VEQ5 465 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 MCATQ8IVS2 390 aaKnown RBP7.11□□□□□ -1.27
ATXN3-219ENST00000553488 TRIM48Q8IWZ4 208 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 RHOT1Q8IXI2 618 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 RBM12BQ8IXT5 1001 aaKnown RBP7.11□□□□□ -1.27
ATXN3-219ENST00000553488 SRRM1Q8IYB3 904 aaKnown RBP7.11□□□□□ -1.27
ATXN3-219ENST00000553488 D2HGDHQ8N465 521 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 GLIS1Q8NBF1 620 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 SIDT2Q8NBJ9 832 aaKnown RBP7.11□□□□□ -1.27
ATXN3-219ENST00000553488 LPCAT1Q8NF37 534 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 UBXN4Q92575 508 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 INPP5DQ92835 1189 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 MRRFQ96E11 262 aaKnown RBP7.11□□□□□ -1.27
ATXN3-219ENST00000553488 ZDHHC12Q96GR4 267 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 ZNF514Q96K75 400 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-219ENST00000553488 C5orf34Q96MH7 638 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 LRFN5Q96NI6 719 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 CLSTN2Q9H4D0 955 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 FAM83DQ9H4H8 585 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 PCDH9Q9HC56 1237 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 PCDH18Q9HCL0 1135 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 SLAMF7Q9NQ25 335 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 WASH6PQ9NQA3 447 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.11□□□□□ -1.27
ATXN3-219ENST00000553488 ASF1BQ9NVP2 202 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 PKD2L2Q9NZM6 624 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 ADAM30Q9UKF2 790 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 RPL26L1Q9UNX3 145 aaKnown RBP7.11□□□□□ -1.27
ATXN3-219ENST00000553488 FARSAQ9Y285 508 aaKnown RBP7.11□□□□□ -1.27
ATXN3-219ENST00000553488 DNAJC16Q9Y2G8 782 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 WDR37Q9Y2I8 494 aa7.11□□□□□ -1.27
ATXN3-219ENST00000553488 NAV3Q8IVL0 2385 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 TLCD2A6NGC4 264 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 LGALS16A8MUM7 142 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 KMOO15229 486 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 RNF8O76064 485 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 CDK11BP21127 795 aaKnown RBP7.1□□□□□ -1.27
ATXN3-219ENST00000553488 FUT4P22083 530 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 RPL10P27635 214 aaKnown RBP7.1□□□□□ -1.27
ATXN3-219ENST00000553488 RORAP35398 523 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 ARL4AP40617 200 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 DRG2P55039 364 aaKnown RBP7.1□□□□□ -1.27
ATXN3-219ENST00000553488 UBE2HP62256 183 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 RPS15P62841 145 aaKnown RBP7.1□□□□□ -1.27
ATXN3-219ENST00000553488 TUBB4BP68371 445 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 SLC25A11Q02978 314 aaKnown RBP7.1□□□□□ -1.27
ATXN3-219ENST00000553488 ACY1Q03154 408 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 GALNT2Q10471 571 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 ABRQ12979 859 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 TUBB2AQ13885 445 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 INSCQ1MX18 579 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 TDRD12Q587J7 1177 aaKnown RBP7.1□□□□□ -1.27
ATXN3-219ENST00000553488 TMEM201Q5SNT2 666 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 FKBP15Q5T1M5 1219 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 IRF2BP2Q7Z5L9 587 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 LRRTM4Q86VH4 590 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 KMT5CQ86Y97 462 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 DSELQ8IZU8 1212 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 IQCKQ8N0W5 287 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 SLC34A3Q8N130 599 aa7.1□□□□□ -1.27
ATXN3-219ENST00000553488 TRAM1L1Q8N609 369 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms