RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 HLA-DPA1P20036 260 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 PPP1R2P41236 205 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 DCDC1P59894 354 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 CACNG1Q06432 222 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 DSG2Q14126 1118 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 NKG7Q16617 165 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 DEFB110Q30KQ9 67 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 PPP1R15BQ5SWA1 713 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 CYP4V2Q6ZWL3 525 aaPredicted RBP11.32□□□□□ -0.6
SNRPF-205ENST00000553192 AMZ2Q86W34 360 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 DOLPP1Q86YN1 238 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.32□□□□□ -0.6
SNRPF-205ENST00000553192 ARRDC2Q8TBH0 407 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 CCHCR1Q8TD31 782 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 AGAP11Q8TF27 550 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 GPR137Q96N19 417 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 MCEEQ96PE7 176 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 ZSCAN5AQ9BUG6 496 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 NAA15Q9BXJ9 866 aaKnown RBP11.32□□□□□ -0.6
SNRPF-205ENST00000553192 PTGFRNQ9P2B2 879 aa11.32□□□□□ -0.6
SNRPF-205ENST00000553192 NFKBIL1Q9UBC1 381 aaPredicted RBP11.32□□□□□ -0.6
SNRPF-205ENST00000553192 LUC7L2Q9Y383 392 aaKnown RBP11.32□□□□□ -0.6
SNRPF-205ENST00000553192 INTS1Q8N201 2190 aaKnown RBP11.31□□□□□ -0.6
SNRPF-205ENST00000553192 GSAPA4D1B5 854 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 EIF3CLB5ME19 914 aaKnown RBP11.31□□□□□ -0.6
SNRPF-205ENST00000553192 E9PLN8 166 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 KCNJ13O60928 360 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 CTAG2O75638 210 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 ZWINTO95229 277 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 WDPCPO95876 746 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 HOXD4P09016 255 aaPredicted RBP11.31□□□□□ -0.6
SNRPF-205ENST00000553192 MSX1P28360 303 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 GCGRP47871 477 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 CTSCP53634 463 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 RPL26P61254 145 aaKnown RBP11.31□□□□□ -0.6
SNRPF-205ENST00000553192 YBX1P67809 324 aaKnown RBP11.31□□□□□ -0.6
SNRPF-205ENST00000553192 TMPRSS15P98073 1019 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 NIPAL4Q0D2K0 466 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 TMEM115Q12893 351 aaPredicted RBP11.31□□□□□ -0.6
SNRPF-205ENST00000553192 XRCC4Q13426 336 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 ZIC1Q15915 447 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 PPP6R3Q5H9R7 873 aaPredicted RBP11.31□□□□□ -0.6
SNRPF-205ENST00000553192 PDPK2PQ6A1A2 396 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 ALG1LQ6GMV1 187 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 SHISA6Q6ZSJ9 500 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 COX15Q7KZN9 410 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 OVCH1Q7RTY7 1134 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 KRTAP1-3Q8IUG1 177 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 ZNF655Q8N720 491 aaPredicted RBP11.31□□□□□ -0.6
SNRPF-205ENST00000553192 BRIX1Q8TDN6 353 aaKnown RBP11.31□□□□□ -0.6
SNRPF-205ENST00000553192 CPLX3Q8WVH0 158 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 CCDC34Q96HJ3 373 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 EIF3CQ99613 913 aaKnown RBP11.31□□□□□ -0.6
SNRPF-205ENST00000553192 VKORC1Q9BQB6 163 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 UCK2Q9BZX2 261 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.31□□□□□ -0.6
SNRPF-205ENST00000553192 WWP1Q9H0M0 922 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 ZFYVE1Q9HBF4 777 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 PCDH9Q9HC56 1237 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 ZNF160Q9HCG1 818 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 SAMSN1Q9NSI8 373 aaKnown RBP11.31□□□□□ -0.6
SNRPF-205ENST00000553192 ADAM22Q9P0K1 906 aa11.31□□□□□ -0.6
SNRPF-205ENST00000553192 RPL26L1Q9UNX3 145 aaKnown RBP11.31□□□□□ -0.6
SNRPF-205ENST00000553192 MXRA5Q9NR99 2828 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 ANKRD66B4E2M5 251 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 BTN3A1O00481 513 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 ZSCAN9O15535 394 aaPredicted RBP11.3□□□□□ -0.6
SNRPF-205ENST00000553192 PMPCBO75439 489 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 ZRANB2O95218 330 aaKnown RBP eCLIP11.3□□□□□ -0.6
SNRPF-205ENST00000553192 PRAMEF1O95521 474 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 ONECUT2O95948 504 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 HPP00738 406 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 DNASE1P24855 282 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 HOXC12P31275 282 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 HCAR3P49019 387 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 CDH6P55285 790 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 CDR2Q01850 454 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 ITKQ08881 620 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 PRKAA1Q13131 559 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 ERMARDQ5T6L9 678 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 METRNLQ641Q3 311 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 TMC3Q7Z5M5 1100 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 CREBRFQ8IUR6 639 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 MARVELD2Q8N4S9 558 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 SIRT6Q8N6T7 355 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 AMER2Q8N7J2 671 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 RASGEF1AQ8N9B8 481 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 FKBP10Q96AY3 582 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 MBD6Q96DN6 1003 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 C12orf66Q96MD2 445 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 POLR1EQ9GZS1 481 aaKnown RBP11.3□□□□□ -0.6
SNRPF-205ENST00000553192 TSPAN10Q9H1Z9 355 aaPredicted RBP11.3□□□□□ -0.6
SNRPF-205ENST00000553192 SOX17Q9H6I2 414 aaPredicted RBP11.3□□□□□ -0.6
SNRPF-205ENST00000553192 MRM3Q9HC36 420 aaKnown RBP11.3□□□□□ -0.6
SNRPF-205ENST00000553192 PCSK1NQ9UHG2 260 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 PPT2Q9UMR5 302 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 HCFC1P51610 2035 aa11.3□□□□□ -0.6
SNRPF-205ENST00000553192 F8VZ95 297 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 MATN2O00339 956 aa11.29□□□□□ -0.6
SNRPF-205ENST00000553192 PRR35P0CG20 571 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms