RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 E2F2Q14209 437 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 DGUOKQ16854 277 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 RFTN2Q52LD8 501 aaPredicted RBP4.77□□□□□ -1.65
LIMA1-214ENST00000552783 SNAP47Q5SQN1 464 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 TTC23Q5W5X9 447 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 TAPT1Q6NXT6 567 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 LETMD1Q6P1Q0 360 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 SYTL1Q8IYJ3 562 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 C2orf69Q8N8R5 385 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 TP53I13Q8NBR0 393 aaPredicted RBP4.77□□□□□ -1.65
LIMA1-214ENST00000552783 IL17RDQ8NFM7 739 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 MCFD2Q8NI22 146 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 NETO1Q8TDF5 533 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 PHF10Q8WUB8 498 aaKnown RBP4.77□□□□□ -1.65
LIMA1-214ENST00000552783 S100ZQ8WXG8 99 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 B3GALT6Q96L58 329 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 TSGA13Q96PP4 275 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 NEDD4LQ96PU5 975 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 SGIP1Q9BQI5 828 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 PAAF1Q9BRP4 392 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 BRINP2Q9C0B6 783 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 MAGEE1Q9HCI5 957 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 ACOT13Q9NPJ3 140 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 GABRQQ9UN88 632 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 TESMINQ9Y4I5 508 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 NPEPPSL1A6NEC2 478 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 GNGT2O14610 69 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 BCKDKO14874 412 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 ANKRD28O15084 1053 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 KMOO15229 486 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 MATN3O15232 486 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 MTSS1O43312 755 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 DYRK3O43781 588 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 ANXA9O76027 345 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 DBTP11182 482 aaKnown RBP4.77□□□□□ -1.65
LIMA1-214ENST00000552783 CD36P16671 472 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 PRKCAP17252 672 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 FDXRP22570 491 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 CCR1P32246 355 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 OR1G1P47890 313 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 DAPP51397 102 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 KPNA2P52292 529 aaKnown RBP4.77□□□□□ -1.65
LIMA1-214ENST00000552783 FCGRTP55899 365 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 HUNKP57058 714 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 YWHAHQ04917 246 aaPredicted RBP4.77□□□□□ -1.65
LIMA1-214ENST00000552783 EFEMP1Q12805 493 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 CDC20Q12834 499 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 LCP2Q13094 533 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 FAM98BQ52LJ0 330 aaKnown RBP4.77□□□□□ -1.65
LIMA1-214ENST00000552783 RFPL4BQ6ZWI9 263 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 ZNF551Q7Z340 670 aaPredicted RBP4.77□□□□□ -1.65
LIMA1-214ENST00000552783 MILR1Q7Z6M3 343 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 ZFAND4Q86XD8 727 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 PARP16Q8N5Y8 322 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 KRTCAP2Q8N6L1 136 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 LEMD2Q8NC56 503 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 C3orf58Q8NDZ4 430 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 ZNF555Q8NEP9 628 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 MYLPFQ96A32 169 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 RMDN1Q96DB5 314 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 SLC47A1Q96FL8 570 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 ZNF599Q96NL3 588 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 SLC9A7Q96T83 725 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 PARK7Q99497 189 aaKnown RBP4.77□□□□□ -1.65
LIMA1-214ENST00000552783 SDHCQ99643 169 aaPredicted RBP4.77□□□□□ -1.65
LIMA1-214ENST00000552783 C17orf80Q9BSJ5 609 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 RIBC2Q9H4K1 309 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 DUSP21Q9H596 190 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 ACTR8Q9H981 624 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 ADPRHL2Q9NX46 363 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 EIF2B4Q9UI10 523 aaKnown RBP4.77□□□□□ -1.65
LIMA1-214ENST00000552783 LEF1Q9UJU2 399 aaPredicted RBP4.77□□□□□ -1.65
LIMA1-214ENST00000552783 ST3GAL5Q9UNP4 418 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 ABCG2Q9UNQ0 655 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 CDH23Q9H251 3354 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 C16orf96A6NNT2 1141 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 EFCAB9A8MZ26 197 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 M0R082 166 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 RGS13O14921 159 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 RAD51BO15315 384 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 PAGE1O75459 146 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 MFN2O95140 757 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 KRT75O95678 551 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 ADRA2AP08913 450 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 CNPP09543 421 aaKnown RBP4.77□□□□□ -1.65
LIMA1-214ENST00000552783 CHRNB1P11230 501 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 CCNCP24863 283 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 HOXA9P31269 272 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 KRT20P35900 424 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 SERPINH1P50454 418 aaKnown RBP4.77□□□□□ -1.65
LIMA1-214ENST00000552783 ERVPABLB-1P60509 514 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 GABARAPL2P60520 117 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 SLC14A1Q13336 389 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 SIRPB2Q5JXA9 342 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 ATAD3CQ5T2N8 411 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 SYT6Q5T7P8 510 aaPredicted RBP4.77□□□□□ -1.65
LIMA1-214ENST00000552783 RSBN1Q5VWQ0 802 aaPredicted RBP4.77□□□□□ -1.65
LIMA1-214ENST00000552783 LIMS2Q7Z4I7 341 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 NECAB2Q7Z6G3 386 aa4.77□□□□□ -1.65
LIMA1-214ENST00000552783 PROSER1Q86XN7 944 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms